RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 THNSL1Q8IYQ7 743 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 H3BRJ5 948 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 CPB1P15086 417 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 CDC25AP30304 524 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 ARHGAP4P98171 946 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 CFAP221Q4G0U5 840 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 TRIM59Q8IWR1 403 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 IFT43Q96FT9 208 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 MMP19Q99542 508 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 NUP58Q9BVL2 599 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 TNKSO95271 1327 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 CPP00450 1065 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 INHBAP08476 426 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 SRGAP2BP0DMP2 458 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 RASSF7Q02833 373 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 PTK2Q05397 1052 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 KLHL40Q2TBA0 621 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 KBTBD3Q8NAB2 608 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 PIGOQ8TEQ8 1089 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 LZICQ8WZA0 190 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 NACC1Q96RE7 527 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 UBE2TQ9NPD8 197 aaPredicted RBP9.12□□□□□ -0.95
SCN9A-203ENST00000409672 ARMCX3Q9UH62 379 aaPredicted RBP9.12□□□□□ -0.95
SCN9A-203ENST00000409672 PNMA3Q9UL41 463 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 XDHP47989 1333 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 NSFP46459 744 aaKnown RBP9.12□□□□□ -0.95
SCN9A-203ENST00000409672 MYO1EQ12965 1108 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 PTGDRQ13258 359 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 KIF19Q2TAC6 998 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 RRP9O43818 475 aaKnown RBP9.12□□□□□ -0.95
SCN9A-203ENST00000409672 TOM1L1O75674 476 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 SEC24BO95487 1268 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 ARL4DP49703 201 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 THEMIS2Q5TEJ8 643 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 CYFIP1Q7L576 1253 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 SMAD5Q99717 465 aaKnown RBP9.12□□□□□ -0.95
SCN9A-203ENST00000409672 ITSN2Q9NZM3 1697 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 OR52Z1P0C646 297 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 SLC17A8Q8NDX2 589 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 KIAA0586Q9BVV6 1533 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 MIS12Q9H081 205 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 GPBP1L1Q9HC44 474 aaPredicted RBP9.12□□□□□ -0.95
SCN9A-203ENST00000409672 CUL7Q14999 1698 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 A0A0G2JLW4 131 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 DNAJC6O75061 913 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 GPC4O75487 556 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 DDAH1O94760 285 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 MAPK4P31152 587 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 KCNJ6P48051 423 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 CYP4F22Q6NT55 531 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 POLR3AO14802 1390 aaPredicted RBP9.12□□□□□ -0.95
SCN9A-203ENST00000409672 USP14P54578 494 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 PEX3P56589 373 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 SYDE2Q5VT97 1194 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 ATP8B3O60423 1300 aa9.12□□□□□ -0.95
SCN9A-203ENST00000409672 BMP3P12645 472 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 NLRP12P59046 1061 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 VMP1Q96GC9 406 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 IWS1Q96ST2 819 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 NCF2P19878 526 aaPredicted RBP9.11□□□□□ -0.95
SCN9A-203ENST00000409672 PPP6R3Q5H9R7 873 aaPredicted RBP9.11□□□□□ -0.95
SCN9A-203ENST00000409672 ARHGEF18Q6ZSZ5 1173 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 C11orf96Q7Z7L8 435 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 SIX5Q8N196 739 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 PPHLN1Q8NEY8 458 aaKnown RBP9.11□□□□□ -0.95
SCN9A-203ENST00000409672 TPCN1Q9ULQ1 816 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 USH1CQ9Y6N9 552 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 PRAMEF22A3QJZ6 481 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 NNMTP40261 264 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 FAM83BQ5T0W9 1011 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 SPOPLQ6IQ16 392 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 RNF207Q6ZRF8 634 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 TRIM67Q6ZTA4 783 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 IL16Q14005 1332 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 PPFIA2O75334 1257 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 APOEP02649 317 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 CTNNA1P35221 906 aaKnown RBP9.11□□□□□ -0.95
SCN9A-203ENST00000409672 HDAC1Q13547 482 aaPredicted RBP9.11□□□□□ -0.95
SCN9A-203ENST00000409672 CERS3Q8IU89 383 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.11□□□□□ -0.95
SCN9A-203ENST00000409672 PPP1R36Q96LQ0 422 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 TOP2BQ02880 1626 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 DRP2Q13474 957 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 MFSD14CQ5VZR4 134 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 CC2D1AQ6P1N0 951 aaPredicted RBP9.11□□□□□ -0.95
SCN9A-203ENST00000409672 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.11□□□□□ -0.95
SCN9A-203ENST00000409672 THOC1Q96FV9 657 aaKnown RBP9.11□□□□□ -0.95
SCN9A-203ENST00000409672 RSRC1Q96IZ7 334 aaKnown RBP9.11□□□□□ -0.95
SCN9A-203ENST00000409672 ELP3Q9H9T3 547 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 BTN2A2Q8WVV5 523 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 SYMPKQ92797 1274 aaKnown RBP9.11□□□□□ -0.95
SCN9A-203ENST00000409672 CBX8Q9HC52 389 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 PRKAB2O43741 272 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 SRGAP2O75044 1071 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 MECOMQ03112 1051 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 PIGSQ96S52 555 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 SPON2Q9BUD6 331 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 USP26Q9BXU7 913 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 ZBTB1Q9Y2K1 713 aa9.11□□□□□ -0.95
SCN9A-203ENST00000409672 GH2P01242 217 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms