RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 BRDTQ58F21 947 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-207ENST00000409417 NLRX1Q86UT6 975 aa22.67■■□□□ 1.22
PDLIM2-207ENST00000409417 DAGLBQ8NCG7 672 aa22.67■■□□□ 1.22
PDLIM2-207ENST00000409417 EMID1Q96A84 441 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-207ENST00000409417 GPRASP2Q96D09 838 aa22.67■■□□□ 1.22
PDLIM2-207ENST00000409417 UBIAD1Q9Y5Z9 338 aa22.67■■□□□ 1.22
PDLIM2-207ENST00000409417 CEP290O15078 2479 aa22.67■■□□□ 1.22
PDLIM2-207ENST00000409417 ARHGAP4P98171 946 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 ARHGAP1Q07960 439 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 LAMC2Q13753 1193 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 NPY5RQ15761 445 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 RASGRP4Q8TDF6 673 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 CRYGNQ8WXF5 182 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 DPF3Q92784 378 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 CDHR1Q96JP9 859 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 PHF20Q9BVI0 1012 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 ELP1O95163 1332 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 CABYRO75952 493 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 UBA1P22314 1058 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 ATN1P54259 1190 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 SEMA3FQ13275 785 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 LRRC26Q2I0M4 334 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 CELF3Q5SZQ8 465 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 SLC39A5Q6ZMH5 540 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 BLIDQ8IZY5 108 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 GLT1D1Q96MS3 346 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 KCNJ14Q9UNX9 436 aa22.66■■□□□ 1.22
PDLIM2-207ENST00000409417 M0R2N6 131 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 MAFGO15525 162 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 CYP3A4P08684 503 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 CEP55Q53EZ4 464 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 MYSM1Q5VVJ2 828 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 CXCL17Q6UXB2 119 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 DHX37Q8IY37 1157 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 AFG1LQ8WV93 481 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 TMX3Q96JJ7 454 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 SENP7Q9BQF6 1050 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 MXRA8Q9BRK3 442 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 JADE2Q9NQC1 790 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 STARD7Q9NQZ5 370 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 GJB4Q9NTQ9 266 aa22.65■■□□□ 1.22
PDLIM2-207ENST00000409417 EVI5O60447 810 aa22.64■■□□□ 1.21
PDLIM2-207ENST00000409417 GGPS1O95749 300 aa22.64■■□□□ 1.21
PDLIM2-207ENST00000409417 HMGN5P82970 282 aaKnown RBP22.64■■□□□ 1.21
PDLIM2-207ENST00000409417 MTMR1Q13613 665 aa22.64■■□□□ 1.21
PDLIM2-207ENST00000409417 NEDD9Q14511 834 aa22.64■■□□□ 1.21
PDLIM2-207ENST00000409417 SNX17Q15036 470 aa22.64■■□□□ 1.21
PDLIM2-207ENST00000409417 C1orf53Q5VUE5 145 aa22.64■■□□□ 1.21
PDLIM2-207ENST00000409417 PPTC7Q8NI37 304 aa22.64■■□□□ 1.21
PDLIM2-207ENST00000409417 KPNA6O60684 536 aa22.63■■□□□ 1.21
PDLIM2-207ENST00000409417 CYP2W1Q8TAV3 490 aa22.63■■□□□ 1.21
PDLIM2-207ENST00000409417 POLR3EQ9NVU0 708 aa22.63■■□□□ 1.21
PDLIM2-207ENST00000409417 MEIS1O00470 390 aa22.62■■□□□ 1.21
PDLIM2-207ENST00000409417 ZNF76P36508 570 aa22.62■■□□□ 1.21
PDLIM2-207ENST00000409417 PURAQ00577 322 aaKnown RBP22.62■■□□□ 1.21
PDLIM2-207ENST00000409417 GIMAP8Q8ND71 665 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-207ENST00000409417 VTI1AQ96AJ9 217 aa22.62■■□□□ 1.21
PDLIM2-207ENST00000409417 SPATA33Q96N06 139 aa22.62■■□□□ 1.21
PDLIM2-207ENST00000409417 MLXIPQ9HAP2 919 aa22.62■■□□□ 1.21
PDLIM2-207ENST00000409417 KCNH7Q9NS40 1196 aa22.62■■□□□ 1.21
PDLIM2-207ENST00000409417 MMP3P08254 477 aa22.61■■□□□ 1.21
PDLIM2-207ENST00000409417 METTL7BQ6UX53 244 aa22.61■■□□□ 1.21
PDLIM2-207ENST00000409417 NIPA1Q7RTP0 329 aa22.61■■□□□ 1.21
PDLIM2-207ENST00000409417 NR2E3Q9Y5X4 410 aa22.61■■□□□ 1.21
PDLIM2-207ENST00000409417 FAM86B1E9PN63 330 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 MYL3P08590 195 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 FAM86B2P0C5J1 330 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 HOXD8P13378 290 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 USP11P51784 963 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 RTP1P59025 263 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 TRIM29Q14134 588 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 DGKDQ16760 1214 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 CYFIP1Q7L576 1253 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 KRT25Q7Z3Z0 450 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 BCAS3Q9H6U6 928 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 A0A0U1RQG5 324 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 SORBS3O60504 671 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 ATP9AO75110 1047 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 PPFIA4O75335 1185 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 KCNA2P16389 499 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 CIITAP33076 1130 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 HSDL1Q3SXM5 330 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 TBCKQ8TEA7 893 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 MTG1Q9BT17 334 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 BRMS1Q9HCU9 246 aa22.6■■□□□ 1.21
PDLIM2-207ENST00000409417 MMP1P03956 469 aa22.59■■□□□ 1.21
PDLIM2-207ENST00000409417 ARP10275 920 aa22.59■■□□□ 1.21
PDLIM2-207ENST00000409417 NONOQ15233 471 aaKnown RBP eCLIP22.59■■□□□ 1.21
PDLIM2-207ENST00000409417 TRIM60Q495X7 471 aa22.59■■□□□ 1.21
PDLIM2-207ENST00000409417 KRT40Q6A162 431 aa22.59■■□□□ 1.21
PDLIM2-207ENST00000409417 C7orf61Q8IZ16 206 aa22.59■■□□□ 1.21
PDLIM2-207ENST00000409417 OXER1Q8TDS5 423 aa22.59■■□□□ 1.21
PDLIM2-207ENST00000409417 ATP11BQ9Y2G3 1177 aa22.59■■□□□ 1.21
PDLIM2-207ENST00000409417 IGLV3-22A0A075B6J6 115 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 CCDC194A0A1B0GVG4 234 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 ARVCFO00192 962 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 KRT2P35908 639 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 CDK7P50613 346 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 ITGA7Q13683 1181 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 ANKRD33Q7Z3H0 272 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms