RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
NIF3L1-204ENST00000409357 GUCA1BQ9UMX6 200 aa11.73□□□□□ -0.53
NIF3L1-204ENST00000409357 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.73□□□□□ -0.53
NIF3L1-204ENST00000409357 STK36Q9NRP7 1315 aa11.73□□□□□ -0.53
NIF3L1-204ENST00000409357 IRS2Q9Y4H2 1338 aa11.73□□□□□ -0.53
NIF3L1-204ENST00000409357 ACTN4O43707 911 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 BUB1BO60566 1050 aaPredicted RBP11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 SETSIPP0DME0 302 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 IMMTQ16891 758 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 CFAP61Q8NHU2 1237 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 SMCR8Q8TEV9 937 aaPredicted RBP11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 NUP58Q9BVL2 599 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 LRRC2Q9BYS8 371 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 PUS3Q9BZE2 481 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 NDST4Q9H3R1 872 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 PLCB1Q9NQ66 1216 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 SLC5A4Q9NY91 659 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 CTNNAL1Q9UBT7 734 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 CAPN11Q9UMQ6 739 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 LEMD3Q9Y2U8 911 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 RIPOR2Q9Y4F9 1068 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 PCDHGC5Q9Y5F6 944 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 ZNF804BA4D1E1 1349 aa11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 MYO5AQ9Y4I1 1855 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-204ENST00000409357 GOLGA6L10A0A0M3HER8 536 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 E7EVH7 732 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 VIL1P09327 827 aaKnown RBP11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 FOSBP53539 338 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 GUCY1A3Q02108 690 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 LBRQ14739 615 aaKnown RBP11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 PTPN21Q16825 1174 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 TSR1Q2NL82 804 aaKnown RBP11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 CCDC57Q2TAC2 916 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 TBC1D10BQ4KMP7 808 aaPredicted RBP11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 GKAP1Q5VSY0 366 aaPredicted RBP11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 HAUS3Q68CZ6 603 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 RUFY4Q6ZNE9 571 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 GALNT15Q8N3T1 639 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 KLHDC4Q8TBB5 520 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 PIK3R5Q8WYR1 880 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 HVCN1Q96D96 273 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 RRP36Q96EU6 259 aaKnown RBP11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 BICD1Q96G01 975 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 LRRC1Q9BTT6 524 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 RGL1Q9NZL6 768 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 HDAC6Q9UBN7 1215 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 DMGDHQ9UI17 866 aaKnown RBP11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 FBXO2Q9UK22 296 aaPredicted RBP11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 SLC12A4Q9UP95 1085 aa11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 SRPRBQ9Y5M8 271 aaKnown RBP11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 ASTN2O75129 1339 aaPredicted RBP11.71□□□□□ -0.53
NIF3L1-204ENST00000409357 CCT8L1PA6NM43 557 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 PPP1R3GB7ZBB8 358 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 G3V3G9 751 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 CPLX1O14810 134 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 PPFIA2O75334 1257 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 NPTXRO95502 500 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 ANP32DO95626 131 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 VIMP08670 466 aaKnown RBP11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 IMPDH2P12268 514 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 CNGA1P29973 690 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 COPB1P53618 953 aaKnown RBP11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 E2F5Q15329 346 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 IFI16Q16666 785 aaKnown RBP11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 SGSM1Q2NKQ1 1148 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 RABL6Q3YEC7 729 aaPredicted RBP11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 RBM12BQ8IXT5 1001 aaKnown RBP11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 PARD3BQ8TEW8 1205 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 CPLX3Q8WVH0 158 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 AIDAQ96BJ3 306 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 GLIS2Q9BZE0 524 aaPredicted RBP11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 CNOT10Q9H9A5 744 aaKnown RBP11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 CHCHD3Q9NX63 227 aaKnown RBP11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 RWDD2AQ9UIY3 292 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 CEP131Q9UPN4 1083 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 RPS6KL1Q9Y6S9 549 aa11.71□□□□□ -0.54
NIF3L1-204ENST00000409357 E7ENQ6 273 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 STXBP3O00186 592 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 N4BP3O15049 544 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 ASAP2O43150 1006 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 TACC1O75410 805 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 WFS1O76024 890 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 BYSLQ13895 437 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 TTF1Q15361 905 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 RILPL1Q5EBL4 403 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 FIGNQ5HY92 759 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 SPDYCQ5MJ68 293 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 RBM26Q5T8P6 1007 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 KRT40Q6A162 431 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 RSBN1LQ6PCB5 846 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 LDHAL6AQ6ZMR3 332 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 MB21D2Q8IYB1 491 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 TRMT44Q8IYL2 757 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 GMLQ99445 158 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 NUP88Q99567 741 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 PYM1Q9BRP8 204 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 ANKRD2Q9GZV1 360 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms