RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 CACNA1HO95180 2353 aa15.13■□□□□ 0.01
CHRNA1-203ENST00000409219 MYH7BA7E2Y1 1941 aa15.13■□□□□ 0.01
CHRNA1-203ENST00000409219 RANBP6O60518 1105 aaKnown RBP15.13■□□□□ 0.01
CHRNA1-203ENST00000409219 TCF15Q12870 199 aa15.13■□□□□ 0.01
CHRNA1-203ENST00000409219 BMP8AQ7Z5Y6 402 aa15.13■□□□□ 0.01
CHRNA1-203ENST00000409219 EDAQ92838 391 aa15.13■□□□□ 0.01
CHRNA1-203ENST00000409219 TBX10O75333 385 aa15.12■□□□□ 0.01
CHRNA1-203ENST00000409219 PDHBP11177 359 aa15.12■□□□□ 0.01
CHRNA1-203ENST00000409219 USH1GQ495M9 461 aa15.12■□□□□ 0.01
CHRNA1-203ENST00000409219 TOP1MTQ969P6 601 aa15.12■□□□□ 0.01
CHRNA1-203ENST00000409219 EMID1Q96A84 441 aaPredicted RBP15.12■□□□□ 0.01
CHRNA1-203ENST00000409219 TMEM47Q9BQJ4 181 aa15.12■□□□□ 0.01
CHRNA1-203ENST00000409219 COL20A1Q9P218 1284 aa15.12■□□□□ 0.01
CHRNA1-203ENST00000409219 PNMA2Q9UL42 364 aa15.12■□□□□ 0.01
CHRNA1-203ENST00000409219 DMDP11532 3685 aa15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 RSPH10B2B2RC85 870 aa15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 NCK2O43639 380 aa15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 UPP2O95045 317 aa15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 RSPH10BP0C881 870 aa15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 TOP1P11387 765 aaKnown RBP15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 HYAL1Q12794 435 aa15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 SMAD4Q13485 552 aaKnown RBP15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 ZMYM1Q5SVZ6 1142 aa15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 SERINC5Q86VE9 423 aa15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 OSBPL7Q9BZF2 842 aa15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 DDX41Q9UJV9 622 aaKnown RBP15.11■□□□□ 0.01
CHRNA1-203ENST00000409219 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 ORC4O43929 436 aa15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 HOXD8P13378 290 aaPredicted RBP15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 THPOP40225 353 aa15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 ZNF543Q08ER8 600 aa15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 TRIM67Q6ZTA4 783 aa15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 DHX37Q8IY37 1157 aaKnown RBP15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 RGS22Q8NE09 1264 aa15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 PPTC7Q8NI37 304 aa15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 TBC1D5Q92609 795 aa15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 GPATCH3Q96I76 525 aa15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 TAAR1Q96RJ0 339 aa15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 ALG13Q9NP73 1137 aaKnown RBP15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 FAM86C1Q9NVL1 165 aa15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 ANAPC4Q9UJX5 808 aa15.1■□□□□ 0.01
CHRNA1-203ENST00000409219 TMEM221A6NGB7 291 aa15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 C5orf67F2Z3F1 127 aa15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 M0R296 226 aa15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 GFRA3O60609 400 aa15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 LINC00271P0C7V0 271 aa15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 CTNNB1P35222 781 aa15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 STXBP2Q15833 593 aa15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 SYTL5Q8TDW5 730 aaPredicted RBP15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 PBXIP1Q96AQ6 731 aa15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 PRRX2Q99811 253 aa15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 IFIH1Q9BYX4 1025 aaKnown RBP15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 DCHS1Q96JQ0 3298 aa15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 PLXNA3P51805 1871 aa15.09■□□□□ 0.01
CHRNA1-203ENST00000409219 STXBP3O00186 592 aa15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 GRM6O15303 877 aa15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 LINC01565O15544 149 aa15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 FGRP09769 529 aa15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 SNHG28P0DPA3 235 aa15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 MS4A1P11836 297 aa15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 GTF2F1P35269 517 aaKnown RBP eCLIP15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 SUGP1Q8IWZ8 645 aaKnown RBP15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 NSUN6Q8TEA1 469 aaKnown RBP15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 SEPT8Q92599 483 aa15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 GTF3C3Q9Y5Q9 886 aa15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 ZFHX2Q9C0A1 2572 aaPredicted RBP15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 SPTBN4Q9H254 2564 aa15.08■□□□□ 0.01
CHRNA1-203ENST00000409219 MYH6P13533 1939 aa15.08■□□□□ 0
CHRNA1-203ENST00000409219 CTSHP09668 335 aa15.08■□□□□ 0
CHRNA1-203ENST00000409219 LAMC2Q13753 1193 aa15.08■□□□□ 0
CHRNA1-203ENST00000409219 VPS53Q5VIR6 699 aa15.08■□□□□ 0
CHRNA1-203ENST00000409219 IWS1Q96ST2 819 aa15.08■□□□□ 0
CHRNA1-203ENST00000409219 RMDN3Q96TC7 470 aa15.08■□□□□ 0
CHRNA1-203ENST00000409219 LMAN2LQ9H0V9 348 aa15.08■□□□□ 0
CHRNA1-203ENST00000409219 CPVLQ9H3G5 476 aa15.08■□□□□ 0
CHRNA1-203ENST00000409219 CD207Q9UJ71 328 aa15.08■□□□□ 0
CHRNA1-203ENST00000409219 MRVI1Q9Y6F6 885 aa15.08■□□□□ 0
CHRNA1-203ENST00000409219 CSPG5O95196 566 aa15.07■□□□□ 0
CHRNA1-203ENST00000409219 HOXC8P31273 242 aa15.07■□□□□ 0
CHRNA1-203ENST00000409219 PKN1Q16512 942 aa15.07■□□□□ 0
CHRNA1-203ENST00000409219 FBXL6Q8N531 539 aa15.07■□□□□ 0
CHRNA1-203ENST00000409219 FIBCD1Q8N539 461 aa15.07■□□□□ 0
CHRNA1-203ENST00000409219 FSD1Q9BTV5 496 aa15.07■□□□□ 0
CHRNA1-203ENST00000409219 C11orf84Q9BUA3 381 aaPredicted RBP15.07■□□□□ 0
CHRNA1-203ENST00000409219 MAF1Q9H063 256 aa15.07■□□□□ 0
CHRNA1-203ENST00000409219 TOMM22Q9NS69 142 aa15.07■□□□□ 0
CHRNA1-203ENST00000409219 TCP11L1Q9NUJ3 509 aa15.07■□□□□ 0
CHRNA1-203ENST00000409219 KIAA1671Q9BY89 1806 aa15.06■□□□□ 0
CHRNA1-203ENST00000409219 RB1P06400 928 aa15.06■□□□□ 0
CHRNA1-203ENST00000409219 EIF2AK2P19525 551 aaKnown RBP15.06■□□□□ 0
CHRNA1-203ENST00000409219 BMPR1AP36894 532 aa15.06■□□□□ 0
CHRNA1-203ENST00000409219 FOXK2Q01167 660 aa15.06■□□□□ 0
CHRNA1-203ENST00000409219 HSDL1Q3SXM5 330 aa15.06■□□□□ 0
CHRNA1-203ENST00000409219 RRP12Q5JTH9 1297 aaKnown RBP15.06■□□□□ 0
CHRNA1-203ENST00000409219 PI4K2BQ8TCG2 481 aa15.06■□□□□ 0
CHRNA1-203ENST00000409219 MSLNLQ96KJ4 702 aa15.06■□□□□ 0
CHRNA1-203ENST00000409219 C16orf70Q9BSU1 422 aa15.06■□□□□ 0
CHRNA1-203ENST00000409219 IGFLR1Q9H665 355 aa15.06■□□□□ 0
CHRNA1-203ENST00000409219 RC3H2Q9HBD1 1191 aaKnown RBP15.06■□□□□ 0
CHRNA1-203ENST00000409219 ADGRA3Q8IWK6 1321 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms