RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 CPT1AP50416 773 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 RTP1P59025 263 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 CHMP4BP1P59074 171 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 PSMC6P62333 389 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 SP4Q02446 784 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 TRIM60Q495X7 471 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 CCSAPQ6IQ19 270 aaPredicted RBP11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 PCSK9Q8NBP7 692 aaKnown RBP11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 PPP1R13LQ8WUF5 828 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 AFG1LQ8WV93 481 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 VTI1AQ96AJ9 217 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 INPP4AQ96PE3 977 aaPredicted RBP11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 GLT8D2Q9H1C3 349 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 SH3GLB2Q9NR46 395 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 DDX41Q9UJV9 622 aaKnown RBP11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 PCDHA4Q9UN74 947 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 SCN5AQ14524 2016 aa11.75□□□□□ -0.53
TSPAN9-202ENST00000407263 FIBPO43427 364 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 EVI5O60447 810 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 STAM2O75886 525 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 FOSP01100 380 aaPredicted RBP11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 MMP3P08254 477 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 ZNF286BP0CG31 522 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 SREBF1P36956 1147 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 ARHGAP4P98171 946 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 SP2Q02086 613 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 MTMR1Q13613 665 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 NLRX1Q86UT6 975 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 DHX37Q8IY37 1157 aaKnown RBP11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 BLIDQ8IZY5 108 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 BICD2Q8TD16 824 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 ZSCAN31Q96LW9 406 aaPredicted RBP11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 GLT1D1Q96MS3 346 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 UIMC1Q96RL1 719 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 TSEN34Q9BSV6 310 aaKnown RBP11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 BCAS3Q9H6U6 928 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 SH2B1Q9NRF2 756 aaPredicted RBP11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 ZMYND8Q9ULU4 1186 aaPredicted RBP11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 Q9Y3F1 56 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 SIP14410 1827 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 ARID2Q68CP9 1835 aa11.74□□□□□ -0.53
TSPAN9-202ENST00000407263 CEP290O15078 2479 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 ZEB2O60315 1214 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 PQBP1O60828 265 aaKnown RBP11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 SYN1P17600 705 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 XBP1P17861 261 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 ITGB5P18084 799 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 ZNF76P36508 570 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 GUCY1B3Q02153 619 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 NPY5RQ15761 445 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 SLC39A5Q6ZMH5 540 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 LOXHD1Q8IVV2 1947 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 DAGLBQ8NCG7 672 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 CYP2W1Q8TAV3 490 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 WASF1Q92558 559 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 GPRASP2Q96D09 838 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 SPATA33Q96N06 139 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 PHF20Q9BVI0 1012 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 PRDM5Q9NQX1 630 aaPredicted RBP11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 TELO2Q9Y4R8 837 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 UBIAD1Q9Y5Z9 338 aa11.73□□□□□ -0.53
TSPAN9-202ENST00000407263 A0A0U1RQG5 324 aaPredicted RBP11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 FAM205CA6NFA0 338 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 DDX39AO00148 427 aaKnown RBP11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 ICAM3P32942 547 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 NKX3-2P78367 333 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 PURAQ00577 322 aaKnown RBP11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 SNX17Q15036 470 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 HSDL1Q3SXM5 330 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 TPRNQ4KMQ1 711 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 BRDTQ58F21 947 aaPredicted RBP11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 FAM47CQ5HY64 1035 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 CELF3Q5SZQ8 465 aaKnown RBP11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 XRRA1Q6P2D8 792 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 KCNV1Q6PIU1 500 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 CYFIP1Q7L576 1253 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 OXER1Q8TDS5 423 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 TMX3Q96JJ7 454 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 MXRA8Q9BRK3 442 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 MLXIPQ9HAP2 919 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 JADE2Q9NQC1 790 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 POLR3EQ9NVU0 708 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 DNAH12Q6ZR08 3092 aa11.72□□□□□ -0.53
TSPAN9-202ENST00000407263 A6NJR5 290 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 SPATA31C2B4DYI2 1134 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 FAM86B1E9PN63 330 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 H0YGN5 161 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 NOP56O00567 594 aaKnown RBP11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 ATP9AO75110 1047 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 FAM86B2P0C5J1 330 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 ARP10275 920 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 KCNA2P16389 499 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 KRT2P35908 639 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 LAMC2Q13753 1193 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 TRIM29Q14134 588 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 INF2Q27J81 1249 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 MYSM1Q5VVJ2 828 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 TRIM50Q86XT4 487 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 TEX2Q8IWB9 1127 aa11.71□□□□□ -0.53
TSPAN9-202ENST00000407263 FAM184AQ8NB25 1140 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms