RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 GNA11P29992 359 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 TRIM29Q14134 588 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 BECN1Q14457 450 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 MUM1L1Q5H9M0 696 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 WWC2Q6AWC2 1192 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 ALYREFQ86V81 257 aaKnown RBP12.1□□□□□ -0.47
RPAIN-204ENST00000405578 NSUN7Q8NE18 718 aaKnown RBP12.1□□□□□ -0.47
RPAIN-204ENST00000405578 BICD2Q8TD16 824 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 GPKOWQ92917 476 aaPredicted RBP eCLIP12.1□□□□□ -0.47
RPAIN-204ENST00000405578 TSEN34Q9BSV6 310 aaKnown RBP12.1□□□□□ -0.47
RPAIN-204ENST00000405578 PSTPIP2Q9H939 334 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 C6orf50Q9HD87 102 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 SH3GLB2Q9NR46 395 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 SYNRGQ9UMZ2 1314 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 FAM86C2PA6NEL3 165 aa12.09□□□□□ -0.47
RPAIN-204ENST00000405578 PPFIA3O75145 1194 aa12.09□□□□□ -0.47
RPAIN-204ENST00000405578 CD2BP2O95400 341 aaKnown RBP12.09□□□□□ -0.47
RPAIN-204ENST00000405578 PGK2P07205 417 aa12.09□□□□□ -0.47
RPAIN-204ENST00000405578 ZNF865P0CJ78 1059 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-204ENST00000405578 CALML3P27482 149 aa12.09□□□□□ -0.47
RPAIN-204ENST00000405578 BAATQ14032 418 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-204ENST00000405578 MCTP2Q6DN12 878 aa12.09□□□□□ -0.47
RPAIN-204ENST00000405578 TMEM199Q8N511 208 aa12.09□□□□□ -0.47
RPAIN-204ENST00000405578 CLEC4DQ8WXI8 215 aa12.09□□□□□ -0.47
RPAIN-204ENST00000405578 TINF2Q9BSI4 451 aa12.09□□□□□ -0.47
RPAIN-204ENST00000405578 A1CFQ9NQ94 594 aaKnown RBP12.09□□□□□ -0.47
RPAIN-204ENST00000405578 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
RPAIN-204ENST00000405578 SMC3Q9UQE7 1217 aa12.09□□□□□ -0.47
RPAIN-204ENST00000405578 DIS3Q9Y2L1 958 aaKnown RBP12.09□□□□□ -0.47
RPAIN-204ENST00000405578 COL4A4P53420 1690 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-204ENST00000405578 MROH7Q68CQ1 1323 aa12.09□□□□□ -0.47
RPAIN-204ENST00000405578 BRWD1Q9NSI6 2320 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 SMCO2A6NFE2 343 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 MOXD2PA6NHM9 499 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 STXBP3O00186 592 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 CTDNEP1O95476 244 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 ADCY7P51828 1080 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 NLRP5P59047 1200 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 RPS6P62753 249 aaKnown RBP12.08□□□□□ -0.48
RPAIN-204ENST00000405578 PKN1Q16512 942 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 PPP2R2DQ66LE6 453 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 GALNT17Q6IS24 598 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 SMARCC2Q8TAQ2 1214 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 HERVK_113Q902F9 699 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 ALG1Q9BT22 464 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 MTIF3Q9H2K0 278 aaKnown RBP12.08□□□□□ -0.48
RPAIN-204ENST00000405578 EHMT1Q9H9B1 1298 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 BRMS1Q9HCU9 246 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 IL23AQ9NPF7 189 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 C11orf16Q9NQ32 467 aa12.08□□□□□ -0.48
RPAIN-204ENST00000405578 LOC102724159A0A0B4J2E5 919 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 ESYT2A0FGR8 921 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 MYADML2A6NDP7 307 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 ASB14A6NK59 587 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 SPDYE3A6NKU9 549 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 PIK3CDO00329 1044 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 JAK2O60674 1132 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 CYP2C18P33260 490 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 HSD17B4P51659 736 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 RABGGTBP53611 331 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 PWP2Q15269 919 aaKnown RBP12.07□□□□□ -0.48
RPAIN-204ENST00000405578 SAFBQ15424 915 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPAIN-204ENST00000405578 KCNA10Q16322 511 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 ZNF467Q7Z7K2 595 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-204ENST00000405578 MSL3Q8N5Y2 521 aaKnown RBP12.07□□□□□ -0.48
RPAIN-204ENST00000405578 KLHDC9Q8NEP7 349 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 DNERQ8NFT8 737 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPAIN-204ENST00000405578 GLT1D1Q96MS3 346 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 RIC8AQ9NPQ8 531 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 VPS54Q9P1Q0 977 aa12.07□□□□□ -0.48
RPAIN-204ENST00000405578 SCN5AQ14524 2016 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 DNAJC25-GNG10A0A024R161 153 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 FOSP01100 380 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-204ENST00000405578 MYOGP15173 224 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 CDK7P50613 346 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 IRX5P78411 483 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-204ENST00000405578 GHRHRQ02643 423 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 CUL4AQ13619 759 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 ZNF792Q3KQV3 632 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 ARHGEF16Q5VV41 709 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 SLC30A10Q6XR72 485 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 FCHSD1Q86WN1 690 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 FAM126BQ8IXS8 530 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 REXO1Q8N1G1 1221 aaKnown RBP12.06□□□□□ -0.48
RPAIN-204ENST00000405578 FAM133AQ8N9E0 248 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 SYTL5Q8TDW5 730 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-204ENST00000405578 NSUN6Q8TEA1 469 aaKnown RBP12.06□□□□□ -0.48
RPAIN-204ENST00000405578 VTI1AQ96AJ9 217 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 INTS4Q96HW7 963 aaKnown RBP12.06□□□□□ -0.48
RPAIN-204ENST00000405578 C8orf76Q96K31 380 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 RMDN3Q96TC7 470 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 ZMYND12Q9H0C1 365 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 CNPY2Q9Y2B0 182 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 ELP1O95163 1332 aa12.06□□□□□ -0.48
RPAIN-204ENST00000405578 A0A0U1RQG5 324 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-204ENST00000405578 TLR3O15455 904 aaKnown RBP12.05□□□□□ -0.48
RPAIN-204ENST00000405578 GPR37L1O60883 481 aa12.05□□□□□ -0.48
RPAIN-204ENST00000405578 FGBP02675 491 aa12.05□□□□□ -0.48
RPAIN-204ENST00000405578 PDCP20941 246 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms