RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 MMP3P08254 477 aa18.91■□□□□ 0.62
CGREF1-205ENST00000404694 UBE2SQ16763 222 aa18.91■□□□□ 0.62
CGREF1-205ENST00000404694 TYW1BQ6NUM6 668 aa18.91■□□□□ 0.62
CGREF1-205ENST00000404694 KCNV1Q6PIU1 500 aa18.91■□□□□ 0.62
CGREF1-205ENST00000404694 EMID1Q96A84 441 aaPredicted RBP18.91■□□□□ 0.62
CGREF1-205ENST00000404694 TPCN1Q9ULQ1 816 aa18.91■□□□□ 0.62
CGREF1-205ENST00000404694 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.91■□□□□ 0.62
CGREF1-205ENST00000404694 V9GY48 417 aaPredicted RBP18.91■□□□□ 0.62
CGREF1-205ENST00000404694 STAM2O75886 525 aa18.9■□□□□ 0.62
CGREF1-205ENST00000404694 PPP1R18Q6NYC8 613 aa18.9■□□□□ 0.62
CGREF1-205ENST00000404694 INPP4AQ96PE3 977 aaPredicted RBP18.9■□□□□ 0.62
CGREF1-205ENST00000404694 hCG_1984214I3L0E3 225 aa18.89■□□□□ 0.61
CGREF1-205ENST00000404694 SOX1O00570 391 aaPredicted RBP18.89■□□□□ 0.61
CGREF1-205ENST00000404694 B4GALT4O60513 344 aa18.89■□□□□ 0.61
CGREF1-205ENST00000404694 TGFB3P10600 412 aa18.89■□□□□ 0.61
CGREF1-205ENST00000404694 UBA1P22314 1058 aaKnown RBP18.89■□□□□ 0.61
CGREF1-205ENST00000404694 NAPAP54920 295 aa18.89■□□□□ 0.61
CGREF1-205ENST00000404694 LAMC2Q13753 1193 aa18.89■□□□□ 0.61
CGREF1-205ENST00000404694 ME3Q16798 604 aa18.89■□□□□ 0.61
CGREF1-205ENST00000404694 GNPTABQ3T906 1256 aa18.89■□□□□ 0.61
CGREF1-205ENST00000404694 PCNX4Q63HM2 1172 aa18.89■□□□□ 0.61
CGREF1-205ENST00000404694 DHX37Q8IY37 1157 aaKnown RBP18.89■□□□□ 0.61
CGREF1-205ENST00000404694 ZNF713Q8N859 430 aaPredicted RBP18.89■□□□□ 0.61
CGREF1-205ENST00000404694 BARHL2Q9NY43 387 aa18.89■□□□□ 0.61
CGREF1-205ENST00000404694 DOCK5Q9H7D0 1870 aa18.88■□□□□ 0.61
CGREF1-205ENST00000404694 STXBP3O00186 592 aa18.88■□□□□ 0.61
CGREF1-205ENST00000404694 GGPS1O95749 300 aa18.88■□□□□ 0.61
CGREF1-205ENST00000404694 TIMP1P01033 207 aa18.88■□□□□ 0.61
CGREF1-205ENST00000404694 SP2Q02086 613 aa18.88■□□□□ 0.61
CGREF1-205ENST00000404694 NBPF20Q3BBV1 942 aa18.88■□□□□ 0.61
CGREF1-205ENST00000404694 LRIT3Q3SXY7 679 aa18.88■□□□□ 0.61
CGREF1-205ENST00000404694 MYSM1Q5VVJ2 828 aa18.88■□□□□ 0.61
CGREF1-205ENST00000404694 PPTC7Q8NI37 304 aa18.88■□□□□ 0.61
CGREF1-205ENST00000404694 TRPV6Q9H1D0 765 aa18.88■□□□□ 0.61
CGREF1-205ENST00000404694 SLKQ9H2G2 1235 aaPredicted RBP18.88■□□□□ 0.61
CGREF1-205ENST00000404694 RTEL1Q9NZ71 1219 aa18.88■□□□□ 0.61
CGREF1-205ENST00000404694 SPDYE3A6NKU9 549 aa18.87■□□□□ 0.61
CGREF1-205ENST00000404694 PFKFB2O60825 505 aa18.87■□□□□ 0.61
CGREF1-205ENST00000404694 PDIA3P30101 505 aaKnown RBP18.87■□□□□ 0.61
CGREF1-205ENST00000404694 ICAM3P32942 547 aa18.87■□□□□ 0.61
CGREF1-205ENST00000404694 DGKDQ16760 1214 aa18.87■□□□□ 0.61
CGREF1-205ENST00000404694 CELF3Q5SZQ8 465 aaKnown RBP18.87■□□□□ 0.61
CGREF1-205ENST00000404694 XRRA1Q6P2D8 792 aa18.87■□□□□ 0.61
CGREF1-205ENST00000404694 PPP1R12CQ9BZL4 782 aa18.87■□□□□ 0.61
CGREF1-205ENST00000404694 RIC8AQ9NPQ8 531 aa18.87■□□□□ 0.61
CGREF1-205ENST00000404694 CIZ1Q9ULV3 898 aaPredicted RBP18.87■□□□□ 0.61
CGREF1-205ENST00000404694 FIBPO43427 364 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 SORBS3O60504 671 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 PDIA4P13667 645 aaKnown RBP18.86■□□□□ 0.61
CGREF1-205ENST00000404694 FPGSQ05932 587 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 SEMA3FQ13275 785 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 NTRK3Q16288 839 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 PFKFB3Q16875 520 aaPredicted RBP18.86■□□□□ 0.61
CGREF1-205ENST00000404694 C9orf50Q5SZB4 431 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 MFSD5Q6N075 450 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 NFRKBQ6P4R8 1299 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 PPP1R13LQ8WUF5 828 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 GTF3C6Q969F1 213 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 LRCH3Q96II8 777 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 SPATA33Q96N06 139 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 LLPHQ9BRT6 129 aaKnown RBP18.86■□□□□ 0.61
CGREF1-205ENST00000404694 TRMT13Q9NUP7 481 aaKnown RBP18.86■□□□□ 0.61
CGREF1-205ENST00000404694 PCDHA6Q9UN73 950 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 PCDHA8Q9Y5H6 950 aa18.86■□□□□ 0.61
CGREF1-205ENST00000404694 SPATA31C2B4DYI2 1134 aa18.85■□□□□ 0.61
CGREF1-205ENST00000404694 HOXD8P13378 290 aaPredicted RBP18.85■□□□□ 0.61
CGREF1-205ENST00000404694 SCG2P13521 617 aa18.85■□□□□ 0.61
CGREF1-205ENST00000404694 ADCY7P51828 1080 aa18.85■□□□□ 0.61
CGREF1-205ENST00000404694 EPHB4P54760 987 aa18.85■□□□□ 0.61
CGREF1-205ENST00000404694 CCT2P78371 535 aaKnown RBP18.85■□□□□ 0.61
CGREF1-205ENST00000404694 SHHQ15465 462 aa18.85■□□□□ 0.61
CGREF1-205ENST00000404694 HSDL1Q3SXM5 330 aa18.85■□□□□ 0.61
CGREF1-205ENST00000404694 FAM47CQ5HY64 1035 aa18.85■□□□□ 0.61
CGREF1-205ENST00000404694 TEX2Q8IWB9 1127 aa18.85■□□□□ 0.61
CGREF1-205ENST00000404694 KAT2BQ92831 832 aa18.85■□□□□ 0.61
CGREF1-205ENST00000404694 PHKBQ93100 1093 aa18.85■□□□□ 0.61
CGREF1-205ENST00000404694 NCOA5Q9HCD5 579 aaKnown RBP18.85■□□□□ 0.61
CGREF1-205ENST00000404694 UMODL1Q5DID0 1318 aa18.85■□□□□ 0.61
CGREF1-205ENST00000404694 SMCO2A6NFE2 343 aa18.84■□□□□ 0.61
CGREF1-205ENST00000404694 PRPF3O43395 683 aaKnown RBP18.84■□□□□ 0.61
CGREF1-205ENST00000404694 F2P00734 622 aa18.84■□□□□ 0.61
CGREF1-205ENST00000404694 ZNF286BP0CG31 522 aa18.84■□□□□ 0.61
CGREF1-205ENST00000404694 PKN1Q16512 942 aa18.84■□□□□ 0.61
CGREF1-205ENST00000404694 RNF26Q9BY78 433 aaPredicted RBP18.84■□□□□ 0.61
CGREF1-205ENST00000404694 HIPK3Q9H422 1215 aa18.84■□□□□ 0.61
CGREF1-205ENST00000404694 BCAS3Q9H6U6 928 aa18.84■□□□□ 0.61
CGREF1-205ENST00000404694 EHMT1Q9H9B1 1298 aa18.84■□□□□ 0.61
CGREF1-205ENST00000404694 MLXIPQ9HAP2 919 aa18.84■□□□□ 0.61
CGREF1-205ENST00000404694 LARGE1O95461 756 aa18.83■□□□□ 0.61
CGREF1-205ENST00000404694 SUPT20HL2P0C7V6 817 aa18.83■□□□□ 0.61
CGREF1-205ENST00000404694 IFNAR1P17181 557 aa18.83■□□□□ 0.61
CGREF1-205ENST00000404694 CYP2C18P33260 490 aa18.83■□□□□ 0.61
CGREF1-205ENST00000404694 DDIT3P35638 169 aa18.83■□□□□ 0.61
CGREF1-205ENST00000404694 CHMP4BP1P59074 171 aa18.83■□□□□ 0.61
CGREF1-205ENST00000404694 PTPN11Q06124 597 aaPredicted RBP18.83■□□□□ 0.61
CGREF1-205ENST00000404694 NEDD9Q14511 834 aa18.83■□□□□ 0.61
CGREF1-205ENST00000404694 NLRX1Q86UT6 975 aa18.83■□□□□ 0.61
CGREF1-205ENST00000404694 GPRASP2Q96D09 838 aa18.83■□□□□ 0.61
CGREF1-205ENST00000404694 PGBD1Q96JS3 809 aa18.83■□□□□ 0.61
CGREF1-205ENST00000404694 LARP6Q9BRS8 491 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms