RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 CTIFO43310 598 aaKnown RBP6.89□□□□□ -1.31
CLIP4-202ENST00000401605 CD53P19397 219 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 COL9A1P20849 921 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 ENPP1P22413 925 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 GNA15P30679 374 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 CDKN1CP49918 316 aaPredicted RBP6.89□□□□□ -1.31
CLIP4-202ENST00000401605 ATP2B2Q01814 1243 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 KIAA0753Q2KHM9 967 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 COBLL1Q53SF7 1204 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 AGAP9Q5VTM2 703 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 INTS3Q68E01 1043 aaKnown RBP6.89□□□□□ -1.31
CLIP4-202ENST00000401605 CDAN1Q8IWY9 1227 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 ATP11CQ8NB49 1132 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 GPT2Q8TD30 523 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 PIBF1Q8WXW3 757 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 TBC1D5Q92609 795 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 OPTNQ96CV9 577 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.89□□□□□ -1.31
CLIP4-202ENST00000401605 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.89□□□□□ -1.31
CLIP4-202ENST00000401605 GGT7Q9UJ14 662 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 HPS5Q9UPZ3 1129 aa6.89□□□□□ -1.31
CLIP4-202ENST00000401605 ESYT3A0FGR9 886 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 PYGLP06737 847 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 LDHCP07864 332 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 TRIM21P19474 475 aaKnown RBP6.88□□□□□ -1.31
CLIP4-202ENST00000401605 CACNB3P54284 484 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 CHMP4BP1P59074 171 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 FUT2Q10981 343 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 VGLL4Q14135 290 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 FBXO46Q6PJ61 603 aaPredicted RBP6.88□□□□□ -1.31
CLIP4-202ENST00000401605 PACS1Q6VY07 963 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 GBP6Q6ZN66 633 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.88□□□□□ -1.31
CLIP4-202ENST00000401605 KRT77Q7Z794 578 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 JAMLQ86YT9 394 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.88□□□□□ -1.31
CLIP4-202ENST00000401605 USP33Q8TEY7 942 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 ZDHHC16Q969W1 377 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 PDLIM2Q96JY6 352 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 ZNF512BQ96KM6 892 aaPredicted RBP6.88□□□□□ -1.31
CLIP4-202ENST00000401605 SH3GL1Q99961 368 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 IRX2Q9BZI1 471 aaPredicted RBP6.88□□□□□ -1.31
CLIP4-202ENST00000401605 ALDH8A1Q9H2A2 487 aaPredicted RBP6.88□□□□□ -1.31
CLIP4-202ENST00000401605 R3HDMLQ9H3Y0 253 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 ELP3Q9H9T3 547 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 UBAP1Q9NZ09 502 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 DENND2AQ9ULE3 1009 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 PCDHB9Q9Y5E1 797 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 CA8P35219 290 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 USP5P45974 858 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 GTF2A2P52657 109 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 ZBED6P86452 979 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 FAM160A1Q05DH4 1040 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 MTX1Q13505 466 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 OXLD1Q5BKU9 147 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 DCAF15Q66K64 600 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 MICALCLQ6ZW33 695 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 LRRC49Q8IUZ0 686 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 ZGPATQ8N5A5 531 aaKnown RBP6.88□□□□□ -1.31
CLIP4-202ENST00000401605 FAM163AQ96GL9 167 aaPredicted RBP6.88□□□□□ -1.31
CLIP4-202ENST00000401605 GSDMAQ96QA5 445 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 SAP130Q9H0E3 1048 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 SLKQ9H2G2 1235 aaPredicted RBP6.88□□□□□ -1.31
CLIP4-202ENST00000401605 ZHX3Q9H4I2 956 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 PA2G4Q9UQ80 394 aaKnown RBP6.88□□□□□ -1.31
CLIP4-202ENST00000401605 SALL1Q9NSC2 1324 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 CACNA1FO60840 1977 aa6.88□□□□□ -1.31
CLIP4-202ENST00000401605 FAM25EA8MYX2 175 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 ZBTB24O43167 697 aaPredicted RBP6.87□□□□□ -1.31
CLIP4-202ENST00000401605 SRGAP3O43295 1099 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 IVLP07476 585 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 RLBP1P12271 317 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 TRIM27P14373 513 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 PRDX5P30044 214 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 ETFBP38117 255 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 SOX10P56693 466 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 SEPT7Q16181 437 aaKnown RBP6.87□□□□□ -1.31
CLIP4-202ENST00000401605 LONRF1Q17RB8 773 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 MAP7D1Q3KQU3 841 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 RRP12Q5JTH9 1297 aaKnown RBP6.87□□□□□ -1.31
CLIP4-202ENST00000401605 ATF7IPQ6VMQ6 1270 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 HS2ST1Q7LGA3 356 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 SPATS2Q86XZ4 545 aaKnown RBP6.87□□□□□ -1.31
CLIP4-202ENST00000401605 ZNF454Q8N9F8 522 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 ERMNQ8TAM6 284 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 NKX2-3Q8TAU0 364 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 GOLGA5Q8TBA6 731 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 ATRIPQ8WXE1 791 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 GPRASP2Q96D09 838 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 DEPDC7Q96QD5 511 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 WRNIP1Q96S55 665 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 FAM129BQ96TA1 746 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 PTPN18Q99952 460 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 LRRCC1Q9C099 1032 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 SLC7A5P2Q9GIP4 190 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 NIF3L1Q9GZT8 377 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 MMADHCQ9H3L0 296 aaPredicted RBP6.87□□□□□ -1.31
CLIP4-202ENST00000401605 CD248Q9HCU0 757 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 FAM53CQ9NYF3 392 aa6.87□□□□□ -1.31
CLIP4-202ENST00000401605 IP6K2Q9UHH9 426 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms