RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 RNF20Q5VTR2 975 aa16.75■□□□□ 0.27
SMARCE1-204ENST00000400122 OTOP2Q7RTS6 562 aa16.75■□□□□ 0.27
SMARCE1-204ENST00000400122 HOMER1Q86YM7 354 aa16.75■□□□□ 0.27
SMARCE1-204ENST00000400122 NOD1Q9Y239 953 aa16.75■□□□□ 0.27
SMARCE1-204ENST00000400122 KAT6AQ92794 2004 aa16.75■□□□□ 0.27
SMARCE1-204ENST00000400122 SLC27A2O14975 620 aa16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 PRC1O43663 620 aa16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 EFCAB14O75071 495 aa16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 CXCL10P02778 98 aa16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 POU3F3P20264 500 aaPredicted RBP16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 RCAN1P53805 252 aa16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 PTK7Q13308 1070 aa16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 NEDD9Q14511 834 aa16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 PCNX4Q63HM2 1172 aa16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 GIMAP8Q8ND71 665 aaPredicted RBP16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 SCLYQ96I15 445 aa16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 SLC28A3Q9HAS3 691 aa16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 SEC63Q9UGP8 760 aaKnown RBP16.74■□□□□ 0.27
SMARCE1-204ENST00000400122 SPATA31C2B4DYI2 1134 aa16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 FIBPO43427 364 aa16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 CAND2O75155 1236 aa16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 SELPP16109 830 aa16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 ATP2A2P16615 1042 aaKnown RBP16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 UBA1P22314 1058 aaKnown RBP16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 HOXA13P31271 388 aaPredicted RBP16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 PSEN2P49810 448 aa16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 CREB3L3Q68CJ9 461 aa16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 GDF6Q6KF10 455 aaPredicted RBP16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 METTL7BQ6UX53 244 aa16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 C7orf31Q8N865 590 aa16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 GAS2L1Q99501 681 aaPredicted RBP16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 USP26Q9BXU7 913 aa16.73■□□□□ 0.27
SMARCE1-204ENST00000400122 CCDC69A6NI79 296 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 GRXCR1A8MXD5 290 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 MEIS2O14770 477 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 MAFGO15525 162 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 GGPS1O95749 300 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 MYCLP12524 364 aaPredicted RBP16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 PBX2P40425 430 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 IRX6P78412 446 aaPredicted RBP16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 MRPS9P82933 396 aaKnown RBP16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 MFSD10Q14728 455 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 KIAA0753Q2KHM9 967 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 HSDL1Q3SXM5 330 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 CHST3Q7LGC8 479 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 IL31RAQ8NI17 732 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 CUL5Q93034 780 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 CDHR1Q96JP9 859 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 SPATA33Q96N06 139 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 C16orf70Q9BSU1 422 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 SPTBN5Q9NRC6 3674 aaKnown RBP16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 MUC3AQ02505 3323 aa16.72■□□□□ 0.27
SMARCE1-204ENST00000400122 SP2Q02086 613 aa16.71■□□□□ 0.27
SMARCE1-204ENST00000400122 KRT32Q14532 448 aa16.71■□□□□ 0.27
SMARCE1-204ENST00000400122 LRRC8DQ7L1W4 858 aa16.71■□□□□ 0.27
SMARCE1-204ENST00000400122 SRBD1Q8N5C6 995 aaKnown RBP16.71■□□□□ 0.27
SMARCE1-204ENST00000400122 FANCBQ8NB91 859 aa16.71■□□□□ 0.27
SMARCE1-204ENST00000400122 HDAC6Q9UBN7 1215 aa16.71■□□□□ 0.27
SMARCE1-204ENST00000400122 SLC12A7Q9Y666 1083 aa16.71■□□□□ 0.27
SMARCE1-204ENST00000400122 EMSYQ7Z589 1322 aa16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 ABHD14A-ACY1A0A1B0GW23 586 aa16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 hCG_1984214I3L0E3 225 aa16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 HMGB1P09429 215 aaKnown RBP16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 CKBP12277 381 aa16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 TRIM71Q2Q1W2 868 aaKnown RBP16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 CNKSR3Q6P9H4 555 aa16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 SERINC5Q86VE9 423 aa16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 FCHSD1Q86WN1 690 aa16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 ZNF713Q8N859 430 aaPredicted RBP16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 DHX38Q92620 1227 aaKnown RBP16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 SYMPKQ92797 1274 aaKnown RBP16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 GPRASP2Q96D09 838 aa16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 MLXIPQ9HAP2 919 aa16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 ANO2Q9NQ90 1003 aa16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 RBM28Q9NW13 759 aaKnown RBP16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 YBX2Q9Y2T7 364 aaKnown RBP16.7■□□□□ 0.26
SMARCE1-204ENST00000400122 PRRC2BQ5JSZ5 2229 aaKnown RBP16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 KIF28PB7ZC32 967 aa16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 H3BRB1 525 aa16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 GPNMBQ14956 572 aa16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 NFXL1Q6ZNB6 911 aa16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 FAM43BQ6ZT52 329 aaPredicted RBP16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 TMTC3Q6ZXV5 915 aa16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 NLRX1Q86UT6 975 aa16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 FBXL16Q8N461 479 aa16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 SMARCC2Q8TAQ2 1214 aa16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 TUT1Q9H6E5 874 aaKnown RBP16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 PSTPIP2Q9H939 334 aa16.69■□□□□ 0.26
SMARCE1-204ENST00000400122 ZBBXA8MT70 800 aa16.68■□□□□ 0.26
SMARCE1-204ENST00000400122 EPB41L2O43491 1005 aaKnown RBP16.68■□□□□ 0.26
SMARCE1-204ENST00000400122 GNAT1P11488 350 aa16.68■□□□□ 0.26
SMARCE1-204ENST00000400122 EXOSC10Q01780 885 aaKnown RBP16.68■□□□□ 0.26
SMARCE1-204ENST00000400122 SEMA3FQ13275 785 aa16.68■□□□□ 0.26
SMARCE1-204ENST00000400122 PPP1R18Q6NYC8 613 aa16.68■□□□□ 0.26
SMARCE1-204ENST00000400122 TRAF7Q6Q0C0 670 aa16.68■□□□□ 0.26
SMARCE1-204ENST00000400122 APOA5Q6Q788 366 aa16.68■□□□□ 0.26
SMARCE1-204ENST00000400122 SYNE3Q6ZMZ3 975 aa16.68■□□□□ 0.26
SMARCE1-204ENST00000400122 DHX32Q7L7V1 743 aaKnown RBP16.68■□□□□ 0.26
SMARCE1-204ENST00000400122 DEFB128Q7Z7B8 93 aa16.68■□□□□ 0.26
SMARCE1-204ENST00000400122 RPAINQ86UA6 219 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms