RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 DSCC1Q9BVC3 393 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 SLC13A4Q9UKG4 626 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 PCDHB4Q9Y5E5 795 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 SOX5P35711 763 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 LRCH2Q5VUJ6 765 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 LRRC8CQ8TDW0 803 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 STAMQ92783 540 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 ZFYVE28Q9HCC9 887 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 E7EWF7 191 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 ADAT2Q7Z6V5 191 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 KLHDC4Q8TBB5 520 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 SART1O43290 800 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 OCM2P0CE71 109 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 OCMP0CE72 109 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 CIITAP33076 1130 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 MFAP3P55082 362 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 NUDCD3Q8IVD9 361 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 HACD3Q9P035 362 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 PCDHA12Q9UN75 941 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 XDHP47989 1333 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 PRDM15P57071 1507 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 ZNF233A6NK53 670 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 SGK1O00141 431 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 GPC4O75487 556 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 DNAJC8O75937 253 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 MAP3K7CLP57077 242 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 GNGT1P63211 74 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 FAM178BQ8IXR5 827 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 TAB3Q8N5C8 712 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 CFAP61Q8NHU2 1237 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 DPH5Q9H2P9 285 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 IFT122Q9HBG6 1241 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 TRPC7Q9HCX4 862 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 TNNQ9UQP3 1299 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 H0YC42 278 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 DCAF4L1Q3SXM0 396 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 SDE2Q6IQ49 451 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 MCUQ8NE86 351 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 PASKQ96RG2 1323 aa11.97□□□□□ -0.49
CACNA1C-215ENST00000399637 ESRRBO95718 433 aa11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 YWHAGP61981 247 aaKnown RBP eCLIP11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 CACTINQ8WUQ7 758 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 LRRC4Q9HBW1 653 aa11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 ADKP55263 362 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 TAF1CQ15572 869 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 REREQ9P2R6 1566 aa11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 USP19O94966 1318 aa11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 INHBAP08476 426 aa11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 NPR1P16066 1061 aa11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 NSFP46459 744 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 POLR2FP61218 127 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 LMNB2Q03252 620 aa11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 PRKCQQ04759 706 aa11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 ARMCX3Q9UH62 379 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 CEP170Q5SW79 1584 aa11.96□□□□□ -0.49
CACNA1C-215ENST00000399637 OR52Z1P0C646 297 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 AOC3Q16853 763 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 GALNT17Q6IS24 598 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 PPM1KQ8N3J5 372 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 ABTB1Q969K4 478 aaPredicted RBP11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 MMP19Q99542 508 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 ZNF148Q9UQR1 794 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 COL4A3BPQ9Y5P4 624 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 ZNF804BA4D1E1 1349 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 GOLGA8HP0CJ92 632 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 SLC7A3Q8WY07 619 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 NLRP4Q96MN2 994 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 THEGQ9P2T0 379 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 EPS15L1Q9UBC2 864 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 RIPOR2Q9Y4F9 1068 aa11.96□□□□□ -0.5
CACNA1C-215ENST00000399637 VGLL3A8MV65 326 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 MAP3K13O43283 966 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 SRGAP2CP0DJJ0 459 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 SESN3P58005 492 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 TWF2Q6IBS0 349 aaKnown RBP11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 G2E3Q7L622 706 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 WRNIP1Q96S55 665 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 DNAJC7Q99615 494 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 HOXB7P09629 217 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 HSPA8P11142 646 aaKnown RBP11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 IGFBP4P22692 258 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 MTERF2Q49AM1 385 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 NEK8Q86SG6 692 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 SIX6OS1Q8N1H7 587 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 ZNF341Q9BYN7 854 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 SBNO1A3KN83 1393 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 ZMYM6O95789 1325 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 GTPBP6O43824 516 aaPredicted RBP11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 HIP1RO75146 1068 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 THOC5Q13769 683 aaKnown RBP11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 HACL1Q9UJ83 578 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 PPP1R9AQ9ULJ8 1098 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 FAF1Q9UNN5 650 aaPredicted RBP11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 PI4K2BG5E9Z4 385 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms