RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 FBXO11Q86XK2 927 aa21.19■□□□□ 0.98
UFD1-202ENST00000399523 PPTC7Q8NI37 304 aa21.19■□□□□ 0.98
UFD1-202ENST00000399523 NSUN6Q8TEA1 469 aaKnown RBP21.19■□□□□ 0.98
UFD1-202ENST00000399523 IWS1Q96ST2 819 aa21.19■□□□□ 0.98
UFD1-202ENST00000399523 YME1L1Q96TA2 773 aa21.19■□□□□ 0.98
UFD1-202ENST00000399523 POP1Q99575 1024 aaKnown RBP21.19■□□□□ 0.98
UFD1-202ENST00000399523 MUTYHQ9UIF7 546 aa21.19■□□□□ 0.98
UFD1-202ENST00000399523 ZFHX2Q9C0A1 2572 aaPredicted RBP21.19■□□□□ 0.98
UFD1-202ENST00000399523 RSPH10B2B2RC85 870 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 ST18O60284 1047 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 RSPH10BP0C881 870 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 SNHG28P0DPA3 235 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 HOXD8P13378 290 aaPredicted RBP21.18■□□□□ 0.98
UFD1-202ENST00000399523 LAMC2Q13753 1193 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 HIC1Q14526 733 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 STXBP2Q15833 593 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 RPAINQ86UA6 219 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 SERINC5Q86VE9 423 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 PRSS33Q8NF86 280 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 SYTL5Q8TDW5 730 aaPredicted RBP21.18■□□□□ 0.98
UFD1-202ENST00000399523 TBC1D5Q92609 795 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 TAAR1Q96RJ0 339 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 PTPRZ1P23471 2315 aaPredicted RBP21.18■□□□□ 0.98
UFD1-202ENST00000399523 SPTBN4Q9H254 2564 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 RALGAPA2Q2PPJ7 1873 aa21.18■□□□□ 0.98
UFD1-202ENST00000399523 ZNF286BP0CG31 522 aa21.17■□□□□ 0.98
UFD1-202ENST00000399523 HNRNPUQ00839 825 aaKnown RBP eCLIP21.17■□□□□ 0.98
UFD1-202ENST00000399523 RNF135Q8IUD6 432 aa21.17■□□□□ 0.98
UFD1-202ENST00000399523 EDAQ92838 391 aa21.17■□□□□ 0.98
UFD1-202ENST00000399523 COL20A1Q9P218 1284 aa21.17■□□□□ 0.98
UFD1-202ENST00000399523 ATG2AQ2TAZ0 1938 aa21.17■□□□□ 0.98
UFD1-202ENST00000399523 MBTPS2O43462 519 aa21.16■□□□□ 0.98
UFD1-202ENST00000399523 THPOP40225 353 aa21.16■□□□□ 0.98
UFD1-202ENST00000399523 PTPN5P54829 565 aa21.16■□□□□ 0.98
UFD1-202ENST00000399523 USH1GQ495M9 461 aa21.16■□□□□ 0.98
UFD1-202ENST00000399523 FSD1Q9BTV5 496 aa21.16■□□□□ 0.98
UFD1-202ENST00000399523 DCTPP1Q9H773 170 aa21.16■□□□□ 0.98
UFD1-202ENST00000399523 TTC41PQ6P2S7 1318 aa21.15■□□□□ 0.98
UFD1-202ENST00000399523 PPFIA4O75335 1185 aa21.15■□□□□ 0.98
UFD1-202ENST00000399523 EIF3JO75822 258 aaKnown RBP21.15■□□□□ 0.98
UFD1-202ENST00000399523 DLX2Q07687 328 aaPredicted RBP21.15■□□□□ 0.98
UFD1-202ENST00000399523 IER5LQ5T953 404 aa21.15■□□□□ 0.98
UFD1-202ENST00000399523 DHX37Q8IY37 1157 aaKnown RBP21.15■□□□□ 0.98
UFD1-202ENST00000399523 SEPT8Q92599 483 aa21.15■□□□□ 0.98
UFD1-202ENST00000399523 TTC14Q96N46 770 aa21.15■□□□□ 0.98
UFD1-202ENST00000399523 RMDN3Q96TC7 470 aa21.15■□□□□ 0.98
UFD1-202ENST00000399523 PRRX2Q99811 253 aa21.15■□□□□ 0.98
UFD1-202ENST00000399523 C5orf67F2Z3F1 127 aa21.14■□□□□ 0.97
UFD1-202ENST00000399523 ALX1Q15699 326 aa21.14■□□□□ 0.97
UFD1-202ENST00000399523 PKN1Q16512 942 aa21.14■□□□□ 0.97
UFD1-202ENST00000399523 PI4K2BQ8TCG2 481 aa21.14■□□□□ 0.97
UFD1-202ENST00000399523 LMAN2LQ9H0V9 348 aa21.14■□□□□ 0.97
UFD1-202ENST00000399523 ABCB11O95342 1321 aa21.13■□□□□ 0.97
UFD1-202ENST00000399523 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.13■□□□□ 0.97
UFD1-202ENST00000399523 UPP2O95045 317 aa21.13■□□□□ 0.97
UFD1-202ENST00000399523 RB1P06400 928 aa21.13■□□□□ 0.97
UFD1-202ENST00000399523 HOXC8P31273 242 aa21.13■□□□□ 0.97
UFD1-202ENST00000399523 HYAL1Q12794 435 aa21.13■□□□□ 0.97
UFD1-202ENST00000399523 SMAD4Q13485 552 aaKnown RBP21.13■□□□□ 0.97
UFD1-202ENST00000399523 GPATCH4Q5T3I0 446 aaKnown RBP21.13■□□□□ 0.97
UFD1-202ENST00000399523 VPS53Q5VIR6 699 aa21.13■□□□□ 0.97
UFD1-202ENST00000399523 TOMM22Q9NS69 142 aa21.13■□□□□ 0.97
UFD1-202ENST00000399523 MRVI1Q9Y6F6 885 aa21.13■□□□□ 0.97
UFD1-202ENST00000399523 LINC00271P0C7V0 271 aa21.12■□□□□ 0.97
UFD1-202ENST00000399523 CLUL1Q15846 466 aa21.12■□□□□ 0.97
UFD1-202ENST00000399523 RRP12Q5JTH9 1297 aaKnown RBP21.12■□□□□ 0.97
UFD1-202ENST00000399523 MYSM1Q5VVJ2 828 aa21.12■□□□□ 0.97
UFD1-202ENST00000399523 TRIM67Q6ZTA4 783 aa21.12■□□□□ 0.97
UFD1-202ENST00000399523 MCF2L2Q86YR7 1114 aa21.12■□□□□ 0.97
UFD1-202ENST00000399523 IFIH1Q9BYX4 1025 aaKnown RBP21.12■□□□□ 0.97
UFD1-202ENST00000399523 OSBPL7Q9BZF2 842 aa21.12■□□□□ 0.97
UFD1-202ENST00000399523 RIF1Q5UIP0 2472 aaKnown RBP21.12■□□□□ 0.97
UFD1-202ENST00000399523 TMEM221A6NGB7 291 aa21.11■□□□□ 0.97
UFD1-202ENST00000399523 M0R296 226 aa21.11■□□□□ 0.97
UFD1-202ENST00000399523 STXBP3O00186 592 aa21.11■□□□□ 0.97
UFD1-202ENST00000399523 CAND2O75155 1236 aa21.11■□□□□ 0.97
UFD1-202ENST00000399523 NR3C2P08235 984 aa21.11■□□□□ 0.97
UFD1-202ENST00000399523 TCF15Q12870 199 aa21.11■□□□□ 0.97
UFD1-202ENST00000399523 ARHGEF16Q5VV41 709 aa21.11■□□□□ 0.97
UFD1-202ENST00000399523 ATP6V0A1Q93050 837 aa21.11■□□□□ 0.97
UFD1-202ENST00000399523 PBXIP1Q96AQ6 731 aa21.11■□□□□ 0.97
UFD1-202ENST00000399523 IL17RAQ96F46 866 aa21.11■□□□□ 0.97
UFD1-202ENST00000399523 C16orf70Q9BSU1 422 aa21.11■□□□□ 0.97
UFD1-202ENST00000399523 C11orf84Q9BUA3 381 aaPredicted RBP21.11■□□□□ 0.97
UFD1-202ENST00000399523 GRM6O15303 877 aa21.1■□□□□ 0.97
UFD1-202ENST00000399523 TBX10O75333 385 aa21.1■□□□□ 0.97
UFD1-202ENST00000399523 GOLGA8HP0CJ92 632 aa21.1■□□□□ 0.97
UFD1-202ENST00000399523 EIF2AK2P19525 551 aaKnown RBP21.1■□□□□ 0.97
UFD1-202ENST00000399523 CTNNB1P35222 781 aa21.1■□□□□ 0.97
UFD1-202ENST00000399523 BMPR1AP36894 532 aa21.1■□□□□ 0.97
UFD1-202ENST00000399523 CDC37Q16543 378 aaPredicted RBP21.1■□□□□ 0.97
UFD1-202ENST00000399523 HSDL1Q3SXM5 330 aa21.1■□□□□ 0.97
UFD1-202ENST00000399523 UBA5Q9GZZ9 404 aa21.1■□□□□ 0.97
UFD1-202ENST00000399523 CPVLQ9H3G5 476 aa21.1■□□□□ 0.97
UFD1-202ENST00000399523 CD207Q9UJ71 328 aa21.1■□□□□ 0.97
UFD1-202ENST00000399523 C17orf102A2RUQ5 167 aa21.09■□□□□ 0.97
UFD1-202ENST00000399523 RGS20O76081 388 aa21.09■□□□□ 0.97
UFD1-202ENST00000399523 FGAP02671 866 aa21.09■□□□□ 0.97
UFD1-202ENST00000399523 CELF3Q5SZQ8 465 aaKnown RBP21.09■□□□□ 0.97
UFD1-202ENST00000399523 KCNV1Q6PIU1 500 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms