RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 CFAP61Q8NHU2 1237 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 INO80BQ9C086 356 aaPredicted RBP23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 SNX25Q9H3E2 840 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 STK17AQ9UEE5 414 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 ZBTB1Q9Y2K1 713 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 TTC37Q6PGP7 1564 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 CFAP74Q9C0B2 1584 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 hCG_1984214I3L0E3 225 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 ZNF713Q8N859 430 aaPredicted RBP23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 H7C0C1 242 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 MYO1FO00160 1098 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 WDR46O15213 610 aaKnown RBP23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 ATP5OP48047 213 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 TTBK2Q6IQ55 1244 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 FTOQ9C0B1 505 aaKnown RBP eCLIP23.25■■□□□ 1.313e-10■□□□□ 8.3
ANKRD28-201ENST00000399451 THAP9Q9H5L6 903 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 PCDHB4Q9Y5E5 795 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 OPHN1O60890 802 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 RFC1P35251 1148 aaPredicted RBP23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 ARHGAP4P98171 946 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 RFX6Q8HWS3 928 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 YWHAGP61981 247 aaKnown RBP eCLIP23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 PTPN21Q16825 1174 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 VSTM4Q8IW00 320 aa23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 NPHP4O75161 1426 aaPredicted RBP23.25■■□□□ 1.31
ANKRD28-201ENST00000399451 SOWAHDA6NJG2 315 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 PRPSAP1Q14558 356 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 MAD1L1Q9Y6D9 718 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 HNRNPDLO14979 420 aaKnown RBP23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 POC1B-GALNT4F8VUJ3 575 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 SGK1O00141 431 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 SESN3P58005 492 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 IGSF1Q8N6C5 1336 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 ENOX1Q8TC92 643 aaKnown RBP23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 SLC7A3Q8WY07 619 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 TRIM56Q9BRZ2 755 aaKnown RBP23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 DAAM1Q9Y4D1 1078 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 LUC7L3O95232 432 aaKnown RBP23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 MAP7D3Q8IWC1 876 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 FAM186BQ8IYM0 893 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 PARD3BQ8TEW8 1205 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 STAG1Q8WVM7 1258 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 IPO11Q9UI26 975 aaKnown RBP23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 PGRMC1O00264 195 aaKnown RBP23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 HVCN1Q96D96 273 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 ATXN8OSP0DMR3 200 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 KRT3P12035 628 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 GCFC2P16383 781 aaKnown RBP23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 RESTQ13127 1097 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 LRRC41Q15345 812 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 CIAPIN1Q6FI81 312 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 EEPD1Q7L9B9 569 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 ACRBPQ8NEB7 543 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 ANTXR1Q9H6X2 564 aa23.24■■□□□ 1.31
ANKRD28-201ENST00000399451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.24■■□□□ 1.311e-6■■□□□ 13.4
ANKRD28-201ENST00000399451 INHBAP08476 426 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 MIGA2Q7L4E1 593 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 EXOC8Q8IYI6 725 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 GOLGA8CPA6NN73 597 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 ACCSQ96QU6 501 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 ATG3Q9NT62 314 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 MOCS3O95396 460 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 DYNLL1P63167 89 aaKnown RBP23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 DBN1Q16643 649 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 SH3BGRP55822 239 aaPredicted RBP23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 ZNF653Q96CK0 615 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 ANAPC5Q9UJX4 755 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 SAT1P21673 171 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 MAPK4P31152 587 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 TBC1D10BQ4KMP7 808 aaPredicted RBP23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 TBCKQ8TEA7 893 aa23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 DDX27Q96GQ7 796 aaKnown RBP23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 NHEJ1Q9H9Q4 299 aaPredicted RBP23.23■■□□□ 1.31
ANKRD28-201ENST00000399451 ZMYND10O75800 440 aa23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 RNF14Q9UBS8 474 aa23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 SRPRBQ9Y5M8 271 aaKnown RBP23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 STAT2P52630 851 aa23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 SEPT12Q8IYM1 358 aa23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 PBKQ96KB5 322 aa23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 GSTA1P08263 222 aa23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 GSTA2P09210 222 aa23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 BBS5Q8N3I7 341 aa23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 ZNF521Q96K83 1311 aa23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 NACC1Q96RE7 527 aa23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 SAMSN1Q9NSI8 373 aaKnown RBP23.22■■□□□ 1.31
ANKRD28-201ENST00000399451 A0A087WWV3 80 aa23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 PANX2Q96RD6 677 aa23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 SEC31BQ9NQW1 1179 aa23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 JRKLQ9Y4A0 524 aa23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 PRPF3O43395 683 aaKnown RBP23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 SLC16A2P36021 539 aa23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 PI4K2BQ8TCG2 481 aa23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 EVI5O60447 810 aa23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 IFT88Q13099 833 aa23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 C10orf76Q5T2E6 689 aa23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 RTKN2Q8IZC4 609 aa23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 FAM133AQ8N9E0 248 aa23.21■■□□□ 1.31
ANKRD28-201ENST00000399451 KMT5AQ9NQR1 393 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms