RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 POLR2FP61218 127 aaKnown RBP21.62■■□□□ 1.05
COL13A1-205ENST00000398978 ZNF662Q6ZS27 426 aa21.62■■□□□ 1.05
COL13A1-205ENST00000398978 SBF2Q86WG5 1849 aa21.62■■□□□ 1.05
COL13A1-205ENST00000398978 MAST2Q6P0Q8 1798 aa21.62■■□□□ 1.05
COL13A1-205ENST00000398978 GOLGA6BA6NDN3 693 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 MPHOSPH10O00566 681 aaKnown RBP21.61■■□□□ 1.05
COL13A1-205ENST00000398978 COASYQ13057 564 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 FIGNQ5HY92 759 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 NGLY1Q96IV0 654 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.61■■□□□ 1.05
COL13A1-205ENST00000398978 TSGA10Q9BZW7 698 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 MTMR4Q9NYA4 1195 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 POLLQ9UGP5 575 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 USP17L15C9J2P7 530 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 USP17L13C9JLJ4 530 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 USP17L11C9JVI0 530 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 USP17L18D6R9N7 530 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 USP17L22D6RA61 530 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 USP17L17D6RBQ6 530 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 USP17L19D6RCP7 530 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 USP17L20D6RJB6 530 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 STAT3P40763 770 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 AARSP49588 968 aaKnown RBP eCLIP21.61■■□□□ 1.05
COL13A1-205ENST00000398978 USP17L24Q0WX57 530 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 USP17L6PQ6QN14 398 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 ADGRF4Q8IZF3 695 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 GUF1Q8N442 669 aaKnown RBP21.61■■□□□ 1.05
COL13A1-205ENST00000398978 TSEN2Q8NCE0 465 aaKnown RBP21.61■■□□□ 1.05
COL13A1-205ENST00000398978 HAS1Q92839 578 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 LSM14BQ9BX40 385 aaKnown RBP21.61■■□□□ 1.05
COL13A1-205ENST00000398978 DDX4Q9NQI0 724 aaKnown RBP21.61■■□□□ 1.05
COL13A1-205ENST00000398978 SRCAPQ6ZRS2 3230 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 USP17L10C9JJH3 530 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 TLR2O60603 784 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 TAL1P17542 331 aaPredicted RBP21.61■■□□□ 1.05
COL13A1-205ENST00000398978 TRAPPC3LQ5T215 181 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 PDXDC1Q6P996 788 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 PROCA1Q8NCQ7 364 aaPredicted RBP21.61■■□□□ 1.05
COL13A1-205ENST00000398978 PACSIN1Q9BY11 444 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 GOLPH3Q9H4A6 298 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 JMJD4Q9H9V9 463 aa21.61■■□□□ 1.05
COL13A1-205ENST00000398978 DDX25Q9UHL0 483 aaKnown RBP21.61■■□□□ 1.05
COL13A1-205ENST00000398978 FAM196BA6NMK8 535 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 SCNN1DP51172 638 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 SNAP25P60880 206 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 PRR5LQ6MZQ0 368 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 MSL3Q8N5Y2 521 aaKnown RBP21.6■■□□□ 1.05
COL13A1-205ENST00000398978 RPGRIP1Q96KN7 1286 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 TLR10Q9BXR5 811 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 VIPAS39Q9H9C1 493 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 KIAA1024Q9UPX6 916 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 FXR2P51116 673 aaKnown RBP eCLIP21.6■■□□□ 1.05
COL13A1-205ENST00000398978 CDK17Q00537 523 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 MYOCDQ8IZQ8 938 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 PANK4Q9NVE7 773 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 GGA1Q9UJY5 639 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 NRAPQ86VF7 1730 aa21.6■■□□□ 1.05
COL13A1-205ENST00000398978 HGSNATQ68CP4 663 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 AENQ8WTP8 325 aaKnown RBP21.59■■□□□ 1.05
COL13A1-205ENST00000398978 ALS2CR12Q96Q35 445 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 DAGLAQ9Y4D2 1042 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 POTEB3A0JP26 581 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 POTECB2RU33 542 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 MCM3P25205 808 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 TRADDQ15628 312 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 KLHDC7AQ5VTJ3 777 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 HAUS3Q68CZ6 603 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 POTEBQ6S5H4 581 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 FNBP4Q8N3X1 1017 aaPredicted RBP21.59■■□□□ 1.05
COL13A1-205ENST00000398978 DNAJC19Q96DA6 116 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 BCAS3Q9H6U6 928 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 STK17AQ9UEE5 414 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 PVALEFA0A1B0GWK0 134 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 NOL4O94818 638 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 HNRNPH3P31942 346 aaKnown RBP21.59■■□□□ 1.05
COL13A1-205ENST00000398978 RAPGEF1Q13905 1077 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 FAM184BQ9ULE4 1060 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 HYOU1Q9Y4L1 999 aa21.59■■□□□ 1.05
COL13A1-205ENST00000398978 GOLGA6CA6NDK9 693 aa21.58■■□□□ 1.05
COL13A1-205ENST00000398978 GOLGA6DP0CG33 693 aa21.58■■□□□ 1.05
COL13A1-205ENST00000398978 CCDC84Q86UT8 332 aaPredicted RBP21.58■■□□□ 1.05
COL13A1-205ENST00000398978 IFT81Q8WYA0 676 aa21.58■■□□□ 1.05
COL13A1-205ENST00000398978 TBC1D5Q92609 795 aa21.58■■□□□ 1.05
COL13A1-205ENST00000398978 TSG101Q99816 390 aa21.58■■□□□ 1.05
COL13A1-205ENST00000398978 GOLGA6AQ9NYA3 693 aa21.58■■□□□ 1.05
COL13A1-205ENST00000398978 CDK5RAP2Q96SN8 1893 aa21.58■■□□□ 1.04
COL13A1-205ENST00000398978 ACTN1P12814 892 aa21.58■■□□□ 1.04
COL13A1-205ENST00000398978 FAM26FQ5R3K3 315 aa21.58■■□□□ 1.04
COL13A1-205ENST00000398978 FAM83BQ5T0W9 1011 aa21.58■■□□□ 1.04
COL13A1-205ENST00000398978 RC3H1Q5TC82 1133 aaKnown RBP21.58■■□□□ 1.04
COL13A1-205ENST00000398978 KCTD16Q68DU8 428 aa21.58■■□□□ 1.04
COL13A1-205ENST00000398978 CCDC70Q6NSX1 233 aa21.58■■□□□ 1.04
COL13A1-205ENST00000398978 FAM133AQ8N9E0 248 aa21.58■■□□□ 1.04
COL13A1-205ENST00000398978 PALMO75781 387 aa21.57■■□□□ 1.04
COL13A1-205ENST00000398978 ARL8AQ96BM9 186 aa21.57■■□□□ 1.04
COL13A1-205ENST00000398978 RASSF4Q9H2L5 321 aa21.57■■□□□ 1.04
COL13A1-205ENST00000398978 PCDHA12Q9UN75 941 aa21.57■■□□□ 1.04
COL13A1-205ENST00000398978 COL4A3BPQ9Y5P4 624 aa21.57■■□□□ 1.04
COL13A1-205ENST00000398978 MEIS1O00470 390 aa21.57■■□□□ 1.04
COL13A1-205ENST00000398978 IVLP07476 585 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms