RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 PPFIA4O75335 1185 aa16.66■□□□□ 0.26
RAB1A-201ENST00000398529 LGR5O75473 907 aa16.66■□□□□ 0.26
RAB1A-201ENST00000398529 LEXMQ3ZCV2 418 aa16.66■□□□□ 0.26
RAB1A-201ENST00000398529 ASPRV1Q53RT3 343 aa16.66■□□□□ 0.26
RAB1A-201ENST00000398529 SPRED2Q7Z698 418 aa16.66■□□□□ 0.26
RAB1A-201ENST00000398529 FBXO11Q86XK2 927 aa16.66■□□□□ 0.26
RAB1A-201ENST00000398529 ADGRF4Q8IZF3 695 aa16.66■□□□□ 0.26
RAB1A-201ENST00000398529 PNMA1Q8ND90 353 aa16.66■□□□□ 0.26
RAB1A-201ENST00000398529 DHX38Q92620 1227 aaKnown RBP16.66■□□□□ 0.26
RAB1A-201ENST00000398529 ZKSCAN3Q9BRR0 538 aa16.66■□□□□ 0.26
RAB1A-201ENST00000398529 CCDC171Q6TFL3 1326 aa16.66■□□□□ 0.26
RAB1A-201ENST00000398529 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.65■□□□□ 0.26
RAB1A-201ENST00000398529 A0A0D9SFI3 127 aa16.65■□□□□ 0.26
RAB1A-201ENST00000398529 CFBP00751 764 aa16.65■□□□□ 0.26
RAB1A-201ENST00000398529 NR3C2P08235 984 aa16.65■□□□□ 0.26
RAB1A-201ENST00000398529 PARP1P09874 1014 aaKnown RBP16.65■□□□□ 0.26
RAB1A-201ENST00000398529 ZNF286BP0CG31 522 aa16.65■□□□□ 0.26
RAB1A-201ENST00000398529 EIF2AK2P19525 551 aaKnown RBP16.65■□□□□ 0.26
RAB1A-201ENST00000398529 ZNF618Q5T7W0 954 aa16.65■□□□□ 0.26
RAB1A-201ENST00000398529 PTCRAQ6ISU1 281 aaPredicted RBP16.65■□□□□ 0.26
RAB1A-201ENST00000398529 MYOCDQ8IZQ8 938 aa16.65■□□□□ 0.26
RAB1A-201ENST00000398529 TBC1D5Q92609 795 aa16.65■□□□□ 0.26
RAB1A-201ENST00000398529 SAMD11Q96NU1 681 aa16.65■□□□□ 0.26
RAB1A-201ENST00000398529 UIMC1Q96RL1 719 aa16.65■□□□□ 0.26
RAB1A-201ENST00000398529 CTAGE1Q96RT6 745 aa16.65■□□□□ 0.26
RAB1A-201ENST00000398529 VAT1LQ9HCJ6 419 aa16.65■□□□□ 0.26
RAB1A-201ENST00000398529 PRR33A8MZF0 331 aa16.64■□□□□ 0.25
RAB1A-201ENST00000398529 RSPH10B2B2RC85 870 aa16.64■□□□□ 0.25
RAB1A-201ENST00000398529 F2P00734 622 aa16.64■□□□□ 0.25
RAB1A-201ENST00000398529 RSPH10BP0C881 870 aa16.64■□□□□ 0.25
RAB1A-201ENST00000398529 MYCLP12524 364 aaPredicted RBP16.64■□□□□ 0.25
RAB1A-201ENST00000398529 GSPT1P15170 499 aaKnown RBP16.64■□□□□ 0.25
RAB1A-201ENST00000398529 THPOP40225 353 aa16.64■□□□□ 0.25
RAB1A-201ENST00000398529 NMIQ13287 307 aaPredicted RBP16.64■□□□□ 0.25
RAB1A-201ENST00000398529 GPNMBQ14956 572 aa16.64■□□□□ 0.25
RAB1A-201ENST00000398529 EP400NLQ6ZTU2 488 aa16.64■□□□□ 0.25
RAB1A-201ENST00000398529 FAM178BQ8IXR5 827 aa16.64■□□□□ 0.25
RAB1A-201ENST00000398529 RILPL2Q969X0 211 aa16.64■□□□□ 0.25
RAB1A-201ENST00000398529 SPATA33Q96N06 139 aa16.64■□□□□ 0.25
RAB1A-201ENST00000398529 CPVLQ9H3G5 476 aa16.64■□□□□ 0.25
RAB1A-201ENST00000398529 TRAF1Q13077 416 aa16.63■□□□□ 0.25
RAB1A-201ENST00000398529 QRICH1Q2TAL8 776 aa16.63■□□□□ 0.25
RAB1A-201ENST00000398529 TIGD5Q53EQ6 642 aa16.63■□□□□ 0.25
RAB1A-201ENST00000398529 SEPT8Q92599 483 aa16.63■□□□□ 0.25
RAB1A-201ENST00000398529 MRPL38Q96DV4 380 aaKnown RBP16.63■□□□□ 0.25
RAB1A-201ENST00000398529 YME1L1Q96TA2 773 aa16.63■□□□□ 0.25
RAB1A-201ENST00000398529 AMNQ9BXJ7 453 aa16.63■□□□□ 0.25
RAB1A-201ENST00000398529 PXMP2Q9NR77 195 aa16.63■□□□□ 0.25
RAB1A-201ENST00000398529 MAP3K20Q9NYL2 800 aaKnown RBP16.63■□□□□ 0.25
RAB1A-201ENST00000398529 COL20A1Q9P218 1284 aa16.63■□□□□ 0.25
RAB1A-201ENST00000398529 MICAL3Q7RTP6 2002 aa16.62■□□□□ 0.25
RAB1A-201ENST00000398529 KDM4AO75164 1064 aa16.62■□□□□ 0.25
RAB1A-201ENST00000398529 TBC1D10CQ8IV04 446 aa16.62■□□□□ 0.25
RAB1A-201ENST00000398529 KHSRPQ92945 711 aaKnown RBP eCLIP16.62■□□□□ 0.255e-7■■□□□ 14.5
RAB1A-201ENST00000398529 ZSCAN10Q96SZ4 725 aaPredicted RBP16.62■□□□□ 0.25
RAB1A-201ENST00000398529 C17orf80Q9BSJ5 609 aa16.62■□□□□ 0.25
RAB1A-201ENST00000398529 UBAC1Q9BSL1 405 aa16.62■□□□□ 0.25
RAB1A-201ENST00000398529 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
RAB1A-201ENST00000398529 MUC6Q6W4X9 2439 aa16.62■□□□□ 0.25
RAB1A-201ENST00000398529 C17orf102A2RUQ5 167 aa16.61■□□□□ 0.25
RAB1A-201ENST00000398529 HAS3O00219 553 aa16.61■□□□□ 0.25
RAB1A-201ENST00000398529 TGFB3P10600 412 aa16.61■□□□□ 0.25
RAB1A-201ENST00000398529 SDSP20132 328 aa16.61■□□□□ 0.25
RAB1A-201ENST00000398529 CELF3Q5SZQ8 465 aaKnown RBP16.61■□□□□ 0.25
RAB1A-201ENST00000398529 MYSM1Q5VVJ2 828 aa16.61■□□□□ 0.25
RAB1A-201ENST00000398529 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.61■□□□□ 0.253e-15■■■■■ 45.6
RAB1A-201ENST00000398529 ZNF589Q86UQ0 364 aaPredicted RBP16.61■□□□□ 0.25
RAB1A-201ENST00000398529 DBF4BQ8NFT6 615 aa16.61■□□□□ 0.25
RAB1A-201ENST00000398529 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.61■□□□□ 0.25
RAB1A-201ENST00000398529 ATP6V0A1Q93050 837 aa16.61■□□□□ 0.25
RAB1A-201ENST00000398529 CD320Q9NPF0 282 aa16.61■□□□□ 0.25
RAB1A-201ENST00000398529 C11orf16Q9NQ32 467 aa16.61■□□□□ 0.25
RAB1A-201ENST00000398529 GRXCR2A6NFK2 248 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 NOP56O00567 594 aaKnown RBP16.6■□□□□ 0.25
RAB1A-201ENST00000398529 GGPS1O95749 300 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 GNAT1P11488 350 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 ZNF200P98182 395 aaPredicted RBP16.6■□□□□ 0.25
RAB1A-201ENST00000398529 GPM6BQ13491 265 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 TRIM71Q2Q1W2 868 aaKnown RBP16.6■□□□□ 0.25
RAB1A-201ENST00000398529 EPC2Q52LR7 807 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 BMP2KLQ5H9B9 411 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 SERINC5Q86VE9 423 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 SAMD3Q8N6K7 520 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 BANK1Q8NDB2 785 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 ANKS1AQ92625 1134 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 KRT23Q9C075 422 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 JMJD4Q9H9V9 463 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 NEDD4P46934 1319 aa16.6■□□□□ 0.25
RAB1A-201ENST00000398529 PIEZO1Q92508 2521 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 NCK2O43639 380 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 SORBS3O60504 671 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 CAND2O75155 1236 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 UPP2O95045 317 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 IL9P15248 144 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 CCND2P30279 289 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 HTRA4P83105 476 aaPredicted RBP16.59■□□□□ 0.25
RAB1A-201ENST00000398529 MBTPS1Q14703 1052 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 IMMTQ16891 758 aaKnown RBP16.59■□□□□ 0.25
RAB1A-201ENST00000398529 TCTN1Q2MV58 587 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 PLEKHG4Q58EX7 1191 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms