RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FOSBP53539 338 aa29.13■■■□□ 2.25
U2AF1-203ENST00000398137 FCHSD1Q86WN1 690 aa29.13■■■□□ 2.25
U2AF1-203ENST00000398137 SAMD3Q8N6K7 520 aa29.13■■■□□ 2.25
U2AF1-203ENST00000398137 RIC8AQ9NPQ8 531 aa29.13■■■□□ 2.25
U2AF1-203ENST00000398137 SH3GLB2Q9NR46 395 aa29.13■■■□□ 2.25
U2AF1-203ENST00000398137 ESYT2A0FGR8 921 aa29.12■■■□□ 2.25
U2AF1-203ENST00000398137 MEIS2O14770 477 aa29.12■■■□□ 2.25
U2AF1-203ENST00000398137 PSMC6P62333 389 aa29.12■■■□□ 2.25
U2AF1-203ENST00000398137 PDE4DQ08499 809 aa29.12■■■□□ 2.25
U2AF1-203ENST00000398137 COPS5Q92905 334 aa29.12■■■□□ 2.25
U2AF1-203ENST00000398137 MAP3K20Q9NYL2 800 aaKnown RBP29.12■■■□□ 2.25
U2AF1-203ENST00000398137 KIAA1217Q5T5P2 1943 aa29.12■■■□□ 2.25
U2AF1-203ENST00000398137 PIK3CDO00329 1044 aa29.11■■■□□ 2.25
U2AF1-203ENST00000398137 CABYRO75952 493 aa29.11■■■□□ 2.25
U2AF1-203ENST00000398137 ARIH2O95376 493 aa29.11■■■□□ 2.25
U2AF1-203ENST00000398137 HMGN5P82970 282 aaKnown RBP29.11■■■□□ 2.25
U2AF1-203ENST00000398137 ITGA7Q13683 1181 aa29.11■■■□□ 2.25
U2AF1-203ENST00000398137 ZMYND12Q9H0C1 365 aa29.11■■■□□ 2.25
U2AF1-203ENST00000398137 GJB4Q9NTQ9 266 aa29.11■■■□□ 2.25
U2AF1-203ENST00000398137 MRPL12P52815 198 aaKnown RBP29.1■■■□□ 2.25
U2AF1-203ENST00000398137 NLRP5P59047 1200 aa29.1■■■□□ 2.25
U2AF1-203ENST00000398137 FPGSQ05932 587 aa29.1■■■□□ 2.25
U2AF1-203ENST00000398137 CUL4AQ13619 759 aa29.1■■■□□ 2.25
U2AF1-203ENST00000398137 RMDN3Q96TC7 470 aa29.1■■■□□ 2.25
U2AF1-203ENST00000398137 C6orf50Q9HD87 102 aa29.1■■■□□ 2.25
U2AF1-203ENST00000398137 ADAMTS3O15072 1205 aa29.09■■■□□ 2.25
U2AF1-203ENST00000398137 C16orf59Q7L2K0 433 aa29.09■■■□□ 2.25
U2AF1-203ENST00000398137 KCNJ14Q9UNX9 436 aa29.09■■■□□ 2.25
U2AF1-203ENST00000398137 SCN10AQ9Y5Y9 1956 aa29.09■■■□□ 2.25
U2AF1-203ENST00000398137 XBP1P17861 261 aa29.08■■■□□ 2.25
U2AF1-203ENST00000398137 EIF2AK2P19525 551 aaKnown RBP29.08■■■□□ 2.25
U2AF1-203ENST00000398137 PURAQ00577 322 aaKnown RBP29.08■■■□□ 2.25
U2AF1-203ENST00000398137 FAM109BQ6ICB4 259 aaPredicted RBP29.08■■■□□ 2.25
U2AF1-203ENST00000398137 MFSD5Q6N075 450 aa29.08■■■□□ 2.25
U2AF1-203ENST00000398137 CCDC62Q6P9F0 684 aa29.08■■■□□ 2.25
U2AF1-203ENST00000398137 FAM184AQ8NB25 1140 aa29.08■■■□□ 2.25
U2AF1-203ENST00000398137 OR6J1Q8NGC5 347 aa29.08■■■□□ 2.25
U2AF1-203ENST00000398137 SCFD2Q8WU76 684 aa29.08■■■□□ 2.25
U2AF1-203ENST00000398137 GLT8D2Q9H1C3 349 aa29.08■■■□□ 2.25
U2AF1-203ENST00000398137 PXMP2Q9NR77 195 aa29.08■■■□□ 2.25
U2AF1-203ENST00000398137 TMEM260Q9NX78 707 aa29.08■■■□□ 2.25
U2AF1-203ENST00000398137 CDH23Q9H251 3354 aa29.08■■■□□ 2.25
U2AF1-203ENST00000398137 ZEB2O60315 1214 aa29.07■■■□□ 2.24
U2AF1-203ENST00000398137 GNA11P29992 359 aa29.07■■■□□ 2.24
U2AF1-203ENST00000398137 ARHGEF16Q5VV41 709 aa29.07■■■□□ 2.24
U2AF1-203ENST00000398137 NSUN6Q8TEA1 469 aaKnown RBP29.07■■■□□ 2.24
U2AF1-203ENST00000398137 PPP1R12CQ9BZL4 782 aa29.07■■■□□ 2.24
U2AF1-203ENST00000398137 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.07■■■□□ 2.24
U2AF1-203ENST00000398137 UMODL1Q5DID0 1318 aa29.06■■■□□ 2.24
U2AF1-203ENST00000398137 B4GALT4O60513 344 aa29.06■■■□□ 2.24
U2AF1-203ENST00000398137 REXO1Q8N1G1 1221 aaKnown RBP29.06■■■□□ 2.24
U2AF1-203ENST00000398137 PGBD1Q96JS3 809 aa29.06■■■□□ 2.24
U2AF1-203ENST00000398137 PHF20Q9BVI0 1012 aa29.06■■■□□ 2.24
U2AF1-203ENST00000398137 TRPV6Q9H1D0 765 aa29.06■■■□□ 2.24
U2AF1-203ENST00000398137 SMC3Q9UQE7 1217 aa29.06■■■□□ 2.24
U2AF1-203ENST00000398137 SPDYE3A6NKU9 549 aa29.05■■■□□ 2.24
U2AF1-203ENST00000398137 NKRFO15226 690 aaKnown RBP eCLIP29.05■■■□□ 2.24
U2AF1-203ENST00000398137 TXNP10599 105 aaKnown RBP29.05■■■□□ 2.24
U2AF1-203ENST00000398137 CSF2RAP15509 400 aa29.05■■■□□ 2.24
U2AF1-203ENST00000398137 GJB2P29033 226 aa29.05■■■□□ 2.24
U2AF1-203ENST00000398137 CYP2C18P33260 490 aa29.05■■■□□ 2.24
U2AF1-203ENST00000398137 JAKMIP3Q5VZ66 844 aa29.05■■■□□ 2.24
U2AF1-203ENST00000398137 FAM177A1Q8N128 213 aaPredicted RBP29.05■■■□□ 2.24
U2AF1-203ENST00000398137 IL31RAQ8NI17 732 aa29.05■■■□□ 2.24
U2AF1-203ENST00000398137 BICD2Q8TD16 824 aa29.05■■■□□ 2.24
U2AF1-203ENST00000398137 RASGRP4Q8TDF6 673 aa29.05■■■□□ 2.24
U2AF1-203ENST00000398137 GUCD1Q96NT3 240 aa29.05■■■□□ 2.24
U2AF1-203ENST00000398137 MPHOSPH6Q99547 160 aaKnown RBP29.05■■■□□ 2.24
U2AF1-203ENST00000398137 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.05■■■□□ 2.24
U2AF1-203ENST00000398137 PCDHA4Q9UN74 947 aa29.05■■■□□ 2.24
U2AF1-203ENST00000398137 FRMPD4Q14CM0 1322 aa29.04■■■□□ 2.24
U2AF1-203ENST00000398137 A6NJR5 290 aa29.04■■■□□ 2.24
U2AF1-203ENST00000398137 TLR3O15455 904 aaKnown RBP29.04■■■□□ 2.24
U2AF1-203ENST00000398137 CLK2P49760 499 aaKnown RBP29.04■■■□□ 2.24
U2AF1-203ENST00000398137 TRIM29Q14134 588 aa29.04■■■□□ 2.24
U2AF1-203ENST00000398137 NPY5RQ15761 445 aa29.04■■■□□ 2.24
U2AF1-203ENST00000398137 TEX2Q8IWB9 1127 aa29.04■■■□□ 2.24
U2AF1-203ENST00000398137 RNPC3Q96LT9 517 aaKnown RBP29.04■■■□□ 2.24
U2AF1-203ENST00000398137 PDCD2LQ9BRP1 358 aa29.04■■■□□ 2.24
U2AF1-203ENST00000398137 FOXD4L1Q9NU39 408 aa29.04■■■□□ 2.24
U2AF1-203ENST00000398137 CPT1AP50416 773 aa29.03■■■□□ 2.24
U2AF1-203ENST00000398137 SMAD3P84022 425 aaKnown RBP29.03■■■□□ 2.24
U2AF1-203ENST00000398137 AP3B2Q13367 1082 aa29.03■■■□□ 2.24
U2AF1-203ENST00000398137 BLIDQ8IZY5 108 aa29.03■■■□□ 2.24
U2AF1-203ENST00000398137 DAGLBQ8NCG7 672 aa29.03■■■□□ 2.24
U2AF1-203ENST00000398137 PPP1R13LQ8WUF5 828 aa29.03■■■□□ 2.24
U2AF1-203ENST00000398137 C8orf76Q96K31 380 aa29.03■■■□□ 2.24
U2AF1-203ENST00000398137 IWS1Q96ST2 819 aa29.03■■■□□ 2.24
U2AF1-203ENST00000398137 ANO3Q9BYT9 981 aa29.03■■■□□ 2.24
U2AF1-203ENST00000398137 POLR3EQ9NVU0 708 aa29.03■■■□□ 2.24
U2AF1-203ENST00000398137 PCDHA6Q9UN73 950 aa29.03■■■□□ 2.24
U2AF1-203ENST00000398137 PCDHA8Q9Y5H6 950 aa29.03■■■□□ 2.24
U2AF1-203ENST00000398137 B4DLN1 442 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 MYL3P08590 195 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 GUCY1B3Q02153 619 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 TTLL4Q14679 1199 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 PGM5Q15124 567 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 LY6KQ17RY6 165 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 TMEM240Q5SV17 173 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 KRT40Q6A162 431 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms