RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 BCAS3Q9H6U6 928 aa19.18■□□□□ 0.66
APTR-201ENST00000398043 PRDM5Q9NQX1 630 aaPredicted RBP19.18■□□□□ 0.66
APTR-201ENST00000398043 PCDHA6Q9UN73 950 aa19.18■□□□□ 0.66
APTR-201ENST00000398043 PCDHA8Q9Y5H6 950 aa19.18■□□□□ 0.66
APTR-201ENST00000398043 SCN5AQ14524 2016 aa19.18■□□□□ 0.66
APTR-201ENST00000398043 ESYT2A0FGR8 921 aa19.17■□□□□ 0.66
APTR-201ENST00000398043 SMCO2A6NFE2 343 aa19.17■□□□□ 0.66
APTR-201ENST00000398043 EIF5BO60841 1220 aaKnown RBP19.17■□□□□ 0.66
APTR-201ENST00000398043 FXR1P51114 621 aaKnown RBP eCLIP19.17■□□□□ 0.66
APTR-201ENST00000398043 LAMC2Q13753 1193 aa19.17■□□□□ 0.66
APTR-201ENST00000398043 BRDTQ58F21 947 aaPredicted RBP19.17■□□□□ 0.66
APTR-201ENST00000398043 KAT2BQ92831 832 aa19.17■□□□□ 0.66
APTR-201ENST00000398043 BADQ92934 168 aa19.17■□□□□ 0.66
APTR-201ENST00000398043 RTEL1Q9NZ71 1219 aa19.17■□□□□ 0.66
APTR-201ENST00000398043 PRKAG2Q9UGJ0 569 aa19.17■□□□□ 0.66
APTR-201ENST00000398043 TANC1Q9C0D5 1861 aa19.16■□□□□ 0.66
APTR-201ENST00000398043 FIBPO43427 364 aa19.16■□□□□ 0.66
APTR-201ENST00000398043 ITGB5P18084 799 aa19.16■□□□□ 0.66
APTR-201ENST00000398043 ADCY7P51828 1080 aa19.16■□□□□ 0.66
APTR-201ENST00000398043 HSDL1Q3SXM5 330 aa19.16■□□□□ 0.66
APTR-201ENST00000398043 DHX37Q8IY37 1157 aaKnown RBP19.16■□□□□ 0.66
APTR-201ENST00000398043 ZMYND12Q9H0C1 365 aa19.16■□□□□ 0.66
APTR-201ENST00000398043 TMEM39AQ9NV64 488 aa19.16■□□□□ 0.66
APTR-201ENST00000398043 UBIAD1Q9Y5Z9 338 aa19.16■□□□□ 0.66
APTR-201ENST00000398043 TET1Q8NFU7 2136 aa19.15■□□□□ 0.66
APTR-201ENST00000398043 B4GALT4O60513 344 aa19.15■□□□□ 0.66
APTR-201ENST00000398043 PPFIA3O75145 1194 aa19.15■□□□□ 0.66
APTR-201ENST00000398043 GGPS1O95749 300 aa19.15■□□□□ 0.66
APTR-201ENST00000398043 NBPF20Q3BBV1 942 aa19.15■□□□□ 0.66
APTR-201ENST00000398043 GNPTABQ3T906 1256 aa19.15■□□□□ 0.66
APTR-201ENST00000398043 NFRKBQ6P4R8 1299 aa19.15■□□□□ 0.66
APTR-201ENST00000398043 CRYGNQ8WXF5 182 aa19.15■□□□□ 0.66
APTR-201ENST00000398043 LBHD1Q9BQE6 289 aaPredicted RBP19.15■□□□□ 0.66
APTR-201ENST00000398043 UBE2OQ9C0C9 1292 aaKnown RBP19.15■□□□□ 0.66
APTR-201ENST00000398043 TMEM260Q9NX78 707 aa19.15■□□□□ 0.66
APTR-201ENST00000398043 TPCN1Q9ULQ1 816 aa19.15■□□□□ 0.66
APTR-201ENST00000398043 SPDYE3A6NKU9 549 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 HAS3O00219 553 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 TIMP1P01033 207 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 FOSP01100 380 aaPredicted RBP19.14■□□□□ 0.65
APTR-201ENST00000398043 AK2P54819 239 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 DGKDQ16760 1214 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 TDHQ8IZJ6 230 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 GPRASP2Q96D09 838 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 SENP7Q9BQF6 1050 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 SLC26A6Q9BXS9 759 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 ANO3Q9BYT9 981 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 GLT8D2Q9H1C3 349 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 TRPV6Q9H1D0 765 aa19.14■□□□□ 0.65
APTR-201ENST00000398043 LAMA2P24043 3122 aaKnown RBP19.14■□□□□ 0.65
APTR-201ENST00000398043 TLR3O15455 904 aaKnown RBP19.13■□□□□ 0.65
APTR-201ENST00000398043 PPFIA4O75335 1185 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 F2P00734 622 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 RAG1P15918 1043 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 SCRN1Q12765 414 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 STK3Q13188 491 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 AP3B2Q13367 1082 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 METTL7BQ6UX53 244 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 SESTD1Q86VW0 696 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 PPP1R13LQ8WUF5 828 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 PGBD1Q96JS3 809 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 SPATA33Q96N06 139 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 C16orf70Q9BSU1 422 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 TELO2Q9Y4R8 837 aa19.13■□□□□ 0.65
APTR-201ENST00000398043 MYH9P35579 1960 aaKnown RBP19.13■□□□□ 0.65
APTR-201ENST00000398043 SORBS3O60504 671 aa19.12■□□□□ 0.65
APTR-201ENST00000398043 PFKFB2O60825 505 aa19.12■□□□□ 0.65
APTR-201ENST00000398043 ATP9AO75110 1047 aa19.12■□□□□ 0.65
APTR-201ENST00000398043 KCNA2P16389 499 aa19.12■□□□□ 0.65
APTR-201ENST00000398043 SREBF1P36956 1147 aa19.12■□□□□ 0.65
APTR-201ENST00000398043 EPHB4P54760 987 aa19.12■□□□□ 0.65
APTR-201ENST00000398043 PTPN11Q06124 597 aaPredicted RBP19.12■□□□□ 0.65
APTR-201ENST00000398043 NEDD9Q14511 834 aa19.12■□□□□ 0.65
APTR-201ENST00000398043 CTAGE1Q96RT6 745 aa19.12■□□□□ 0.65
APTR-201ENST00000398043 KIF2CQ99661 725 aa19.12■□□□□ 0.65
APTR-201ENST00000398043 JADE2Q9NQC1 790 aa19.12■□□□□ 0.65
APTR-201ENST00000398043 SH3GLB2Q9NR46 395 aa19.12■□□□□ 0.65
APTR-201ENST00000398043 TRMT13Q9NUP7 481 aaKnown RBP19.12■□□□□ 0.65
APTR-201ENST00000398043 SZT2Q5T011 3432 aa19.11■□□□□ 0.65
APTR-201ENST00000398043 SOX1O00570 391 aaPredicted RBP19.11■□□□□ 0.65
APTR-201ENST00000398043 MFSD5Q6N075 450 aa19.11■□□□□ 0.65
APTR-201ENST00000398043 NLRX1Q86UT6 975 aa19.11■□□□□ 0.65
APTR-201ENST00000398043 CYP2W1Q8TAV3 490 aa19.11■□□□□ 0.65
APTR-201ENST00000398043 CCDC12Q8WUD4 166 aaPredicted RBP19.11■□□□□ 0.65
APTR-201ENST00000398043 NOC4LQ9BVI4 516 aaKnown RBP19.11■□□□□ 0.65
APTR-201ENST00000398043 EHMT1Q9H9B1 1298 aa19.11■□□□□ 0.65
APTR-201ENST00000398043 MLXIPQ9HAP2 919 aa19.11■□□□□ 0.65
APTR-201ENST00000398043 VPS54Q9P1Q0 977 aa19.11■□□□□ 0.65
APTR-201ENST00000398043 UMODL1Q5DID0 1318 aa19.1■□□□□ 0.65
APTR-201ENST00000398043 MAFGO15525 162 aa19.1■□□□□ 0.65
APTR-201ENST00000398043 LARGE1O95461 756 aa19.1■□□□□ 0.65
APTR-201ENST00000398043 CTDNEP1O95476 244 aa19.1■□□□□ 0.65
APTR-201ENST00000398043 ZNF286BP0CG31 522 aa19.1■□□□□ 0.65
APTR-201ENST00000398043 AKAP17AQ02040 695 aaKnown RBP19.1■□□□□ 0.65
APTR-201ENST00000398043 SSRP1Q08945 709 aaKnown RBP19.1■□□□□ 0.65
APTR-201ENST00000398043 ANKRD1Q15327 319 aa19.1■□□□□ 0.65
APTR-201ENST00000398043 NPY5RQ15761 445 aa19.1■□□□□ 0.65
APTR-201ENST00000398043 LRIT3Q3SXY7 679 aa19.1■□□□□ 0.65
APTR-201ENST00000398043 CYFIP1Q7L576 1253 aa19.1■□□□□ 0.65
APTR-201ENST00000398043 GPR20Q99678 358 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms