RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 MYSM1Q5VVJ2 828 aa21.52■■□□□ 1.04
COLCA2-201ENST00000398035 SLC43A3Q8NBI5 491 aa21.52■■□□□ 1.04
COLCA2-201ENST00000398035 PPTC7Q8NI37 304 aa21.52■■□□□ 1.04
COLCA2-201ENST00000398035 ZMYND8Q9ULU4 1186 aaPredicted RBP21.52■■□□□ 1.04
COLCA2-201ENST00000398035 TLR3O15455 904 aaKnown RBP21.51■■□□□ 1.03
COLCA2-201ENST00000398035 GALNT17Q6IS24 598 aa21.51■■□□□ 1.03
COLCA2-201ENST00000398035 REXO1Q8N1G1 1221 aaKnown RBP21.51■■□□□ 1.03
COLCA2-201ENST00000398035 AFG1LQ8WV93 481 aa21.51■■□□□ 1.03
COLCA2-201ENST00000398035 WASF1Q92558 559 aa21.51■■□□□ 1.03
COLCA2-201ENST00000398035 LBHD1Q9BQE6 289 aaPredicted RBP21.51■■□□□ 1.03
COLCA2-201ENST00000398035 PQBP1O60828 265 aaKnown RBP21.5■■□□□ 1.03
COLCA2-201ENST00000398035 GGPS1O95749 300 aa21.5■■□□□ 1.03
COLCA2-201ENST00000398035 CLTBP09497 229 aa21.5■■□□□ 1.03
COLCA2-201ENST00000398035 PTGS1P23219 599 aa21.5■■□□□ 1.03
COLCA2-201ENST00000398035 NLRP5P59047 1200 aa21.5■■□□□ 1.03
COLCA2-201ENST00000398035 SPATA33Q96N06 139 aa21.5■■□□□ 1.03
COLCA2-201ENST00000398035 ANO3Q9BYT9 981 aa21.5■■□□□ 1.03
COLCA2-201ENST00000398035 LIMCH1Q9UPQ0 1083 aa21.5■■□□□ 1.03
COLCA2-201ENST00000398035 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
COLCA2-201ENST00000398035 UBIAD1Q9Y5Z9 338 aa21.5■■□□□ 1.03
COLCA2-201ENST00000398035 MMP3P08254 477 aa21.49■■□□□ 1.03
COLCA2-201ENST00000398035 SYN1P17600 705 aa21.49■■□□□ 1.03
COLCA2-201ENST00000398035 SREBF1P36956 1147 aa21.49■■□□□ 1.03
COLCA2-201ENST00000398035 SP2Q02086 613 aa21.49■■□□□ 1.03
COLCA2-201ENST00000398035 JADE2Q9NQC1 790 aa21.49■■□□□ 1.03
COLCA2-201ENST00000398035 TMEM39AQ9NV64 488 aa21.49■■□□□ 1.03
COLCA2-201ENST00000398035 SUPT20HL2P0C7V6 817 aa21.48■■□□□ 1.03
COLCA2-201ENST00000398035 UBA1P22314 1058 aaKnown RBP21.48■■□□□ 1.03
COLCA2-201ENST00000398035 BMP8BP34820 402 aa21.48■■□□□ 1.03
COLCA2-201ENST00000398035 PTPN11Q06124 597 aaPredicted RBP21.48■■□□□ 1.03
COLCA2-201ENST00000398035 MTMR1Q13613 665 aa21.48■■□□□ 1.03
COLCA2-201ENST00000398035 ME3Q16798 604 aa21.48■■□□□ 1.03
COLCA2-201ENST00000398035 METTL7BQ6UX53 244 aa21.48■■□□□ 1.03
COLCA2-201ENST00000398035 ZFP91Q96JP5 570 aaPredicted RBP21.48■■□□□ 1.03
COLCA2-201ENST00000398035 ZSCAN31Q96LW9 406 aaPredicted RBP21.48■■□□□ 1.03
COLCA2-201ENST00000398035 MXRA8Q9BRK3 442 aa21.48■■□□□ 1.03
COLCA2-201ENST00000398035 KATNAL1Q9BW62 490 aa21.48■■□□□ 1.03
COLCA2-201ENST00000398035 VPS54Q9P1Q0 977 aa21.48■■□□□ 1.03
COLCA2-201ENST00000398035 NOP56O00567 594 aaKnown RBP21.47■■□□□ 1.03
COLCA2-201ENST00000398035 PPFIA3O75145 1194 aa21.47■■□□□ 1.03
COLCA2-201ENST00000398035 ITGB5P18084 799 aa21.47■■□□□ 1.03
COLCA2-201ENST00000398035 ZNF76P36508 570 aa21.47■■□□□ 1.03
COLCA2-201ENST00000398035 FAAP100Q0VG06 881 aa21.47■■□□□ 1.03
COLCA2-201ENST00000398035 CEP55Q53EZ4 464 aa21.47■■□□□ 1.03
COLCA2-201ENST00000398035 JAKMIP3Q5VZ66 844 aa21.47■■□□□ 1.03
COLCA2-201ENST00000398035 NFRKBQ6P4R8 1299 aa21.47■■□□□ 1.03
COLCA2-201ENST00000398035 GTF3C6Q969F1 213 aa21.47■■□□□ 1.03
COLCA2-201ENST00000398035 GDF15Q99988 308 aa21.47■■□□□ 1.03
COLCA2-201ENST00000398035 PRDM5Q9NQX1 630 aaPredicted RBP21.47■■□□□ 1.03
COLCA2-201ENST00000398035 PDLIM7Q9NR12 457 aa21.47■■□□□ 1.03
COLCA2-201ENST00000398035 STK36Q9NRP7 1315 aa21.47■■□□□ 1.03
COLCA2-201ENST00000398035 TNRC18O15417 2968 aaPredicted RBP21.47■■□□□ 1.03
COLCA2-201ENST00000398035 A0A1W2PPC1 479 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 KIAA0355O15063 1070 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 CYP3A4P08684 503 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 HOXD8P13378 290 aaPredicted RBP21.46■■□□□ 1.03
COLCA2-201ENST00000398035 RABEP1Q15276 862 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 CHRDL2Q6WN34 429 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 PCDHA4Q9UN74 947 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 COLQQ9Y215 455 aaPredicted RBP21.46■■□□□ 1.03
COLCA2-201ENST00000398035 LCTP09848 1927 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 ARHGAP4P98171 946 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 HSDL1Q3SXM5 330 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 CYFIP1Q7L576 1253 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 NIPA1Q7RTP0 329 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 FAM126BQ8IXS8 530 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 KIF2CQ99661 725 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 TMEM260Q9NX78 707 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 GRIN2DO15399 1336 aa21.46■■□□□ 1.03
COLCA2-201ENST00000398035 MEIS1O00470 390 aa21.45■■□□□ 1.02
COLCA2-201ENST00000398035 RAG1P15918 1043 aa21.45■■□□□ 1.02
COLCA2-201ENST00000398035 MAGEA10P43363 369 aaPredicted RBP21.45■■□□□ 1.02
COLCA2-201ENST00000398035 PSMC6P62333 389 aa21.45■■□□□ 1.02
COLCA2-201ENST00000398035 SEMA3FQ13275 785 aa21.45■■□□□ 1.02
COLCA2-201ENST00000398035 NBPF20Q3BBV1 942 aa21.45■■□□□ 1.02
COLCA2-201ENST00000398035 DAGLBQ8NCG7 672 aa21.45■■□□□ 1.02
COLCA2-201ENST00000398035 KCNH7Q9NS40 1196 aa21.45■■□□□ 1.02
COLCA2-201ENST00000398035 MCM3APO60318 1980 aa21.44■■□□□ 1.02
COLCA2-201ENST00000398035 MYH6P13533 1939 aa21.44■■□□□ 1.02
COLCA2-201ENST00000398035 TRIM43BA6NCK2 446 aa21.44■■□□□ 1.02
COLCA2-201ENST00000398035 ST18O60284 1047 aa21.44■■□□□ 1.02
COLCA2-201ENST00000398035 CD4P01730 458 aa21.44■■□□□ 1.02
COLCA2-201ENST00000398035 USP11P51784 963 aa21.44■■□□□ 1.02
COLCA2-201ENST00000398035 BLIDQ8IZY5 108 aa21.44■■□□□ 1.02
COLCA2-201ENST00000398035 TRIM43Q96BQ3 446 aaPredicted RBP21.44■■□□□ 1.02
COLCA2-201ENST00000398035 SH2B1Q9NRF2 756 aaPredicted RBP21.44■■□□□ 1.02
COLCA2-201ENST00000398035 ORC3Q9UBD5 711 aaPredicted RBP21.44■■□□□ 1.02
COLCA2-201ENST00000398035 SESTD1Q86VW0 696 aa21.43■■□□□ 1.02
COLCA2-201ENST00000398035 NECAB1Q8N987 351 aa21.43■■□□□ 1.02
COLCA2-201ENST00000398035 CRYGNQ8WXF5 182 aa21.43■■□□□ 1.02
COLCA2-201ENST00000398035 PGBD1Q96JS3 809 aa21.43■■□□□ 1.02
COLCA2-201ENST00000398035 LLPHQ9BRT6 129 aaKnown RBP21.43■■□□□ 1.02
COLCA2-201ENST00000398035 PRO3102Q9H379 93 aa21.43■■□□□ 1.02
COLCA2-201ENST00000398035 FRMPD3Q5JV73 1810 aa21.43■■□□□ 1.02
COLCA2-201ENST00000398035 LRRC37A2A6NM11 1700 aa21.42■■□□□ 1.02
COLCA2-201ENST00000398035 CTDNEP1O95476 244 aa21.42■■□□□ 1.02
COLCA2-201ENST00000398035 TIMP1P01033 207 aa21.42■■□□□ 1.02
COLCA2-201ENST00000398035 KCNA2P16389 499 aa21.42■■□□□ 1.02
COLCA2-201ENST00000398035 SH3RF1Q7Z6J0 888 aa21.42■■□□□ 1.02
COLCA2-201ENST00000398035 C7orf31Q8N865 590 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms