RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 CCSER1Q9C0I3 900 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 STMN4Q9H169 189 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 LRRC63Q05C16 580 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 LLGL1Q15334 1064 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PAXIP1Q6ZW49 1069 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 UNC13DQ70J99 1090 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SH3RF1Q7Z6J0 888 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 NAP1L3Q99457 506 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 STK17AQ9UEE5 414 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 DDX25Q9UHL0 483 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CHMP2AO43633 222 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 HNRNPH1P31943 449 aaKnown RBP12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CCDC50Q8IVM0 306 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GJA10Q969M2 543 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ATP6V1G3Q96LB4 118 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 NT5C3AQ9H0P0 336 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RAB17Q9H0T7 212 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SPATA31A3Q5VYP0 1347 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SPOPO43791 374 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 HLA-DOAP06340 250 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PLCG2P16885 1265 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 LSP1P33241 339 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 HIBCHQ6NVY1 386 aaPredicted RBP12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ALKBH5Q6P6C2 394 aaKnown RBP12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 STXBP4Q6ZWJ1 553 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MMGT1Q8N4V1 131 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 OR2W6PQ8NHA6 318 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 NCAPGQ9BPX3 1015 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 NYXQ9GZU5 481 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 TMEM260Q9NX78 707 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PCDHA6Q9UN73 950 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 DNM3Q9UQ16 869 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PCDHA8Q9Y5H6 950 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 LOC102724428A0A0B4J2F2 783 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GJC1P36383 396 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PLTPP55058 493 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SIK1P57059 783 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 TTI2Q6NXR4 508 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CCDC105Q8IYK2 499 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ANKRD42Q8N9B4 389 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RNPC3Q96LT9 517 aaKnown RBP12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CCT8L2Q96SF2 557 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 STK38LQ9Y2H1 464 aa12.18□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ANKRD62A6NC57 917 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 LRRC10BA6NIK2 292 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CHUKO15111 745 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CALUO43852 315 aaPredicted RBP12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SEL1L2Q5TEA6 688 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 HAUS3Q68CZ6 603 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 VEGFAP15692 232 aaPredicted RBP12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SLCO1A2P46721 670 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CYP4A11Q02928 519 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PABPC4Q13310 644 aaKnown RBP eCLIP12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 UBE2SQ16763 222 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ADGRA1Q86SQ6 560 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RNF10Q8N5U6 811 aaKnown RBP12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GOLPH3Q9H4A6 298 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SH3GLB2Q9NR46 395 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PLAGL2Q9UPG8 496 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ZSCAN5CA6NGD5 496 aaPredicted RBP12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PBX1P40424 430 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 NEDD9Q14511 834 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PDXDC1Q6P996 788 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ZNF473Q8WTR7 871 aaKnown RBP12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 VEZTQ9HBM0 779 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MTUS1Q9ULD2 1270 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CD2APQ9Y5K6 639 aa12.17□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ZNF804BA4D1E1 1349 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RFC4P35249 363 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MAGOHP61326 146 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 AMPD2Q01433 879 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CCDC197Q8NCU1 140 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SPATA20Q8TB22 786 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 N4BP2L2Q92802 583 aaPredicted RBP12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MAGOHBQ96A72 148 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 BARHL2Q9NY43 387 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SLAIN2Q9P270 581 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 REXO2Q9Y3B8 237 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RIMBP2O15034 1052 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CLIC2O15247 247 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 UFL1O94874 794 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MDH1P40925 334 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MAEAQ7L5Y9 396 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 DDX42Q86XP3 938 aaKnown RBP eCLIP12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 KSR1Q8IVT5 923 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CELF1Q92879 486 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 EPN3Q9H201 632 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PSTPIP2Q9H939 334 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 INTS9Q9NV88 658 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CEP72Q9P209 647 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ARHGAP20Q9P2F6 1191 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 AKAP12Q02952 1782 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 FAM205AQ6ZU69 1335 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms