RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 MAPK8IP1Q9UQF2 711 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 PTPN22Q9Y2R2 807 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.41□□□□□ -1.7
UBE3A-202ENST00000397954 SYNGAP1Q96PV0 1343 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 SERTM1A2A2V5 107 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 TCP10L2B9ZVM9 353 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 TRAF5O00463 557 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 STAM2O75886 525 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 IL2RAP01589 272 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 FSHRP23945 695 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 ARID5BQ14865 1188 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 TRIP4Q15650 581 aaPredicted RBP4.4□□□□□ -1.7
UBE3A-202ENST00000397954 DDR2Q16832 855 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 VARS2Q5ST30 1063 aaKnown RBP4.4□□□□□ -1.7
UBE3A-202ENST00000397954 C1orf53Q5VUE5 145 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 CYP4F22Q6NT55 531 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 GPAT2Q6NUI2 795 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 KANK3Q6NY19 840 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 ZNF295-AS1Q8N0V1 137 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 C3orf58Q8NDZ4 430 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 SH3RF3Q8TEJ3 882 aaPredicted RBP4.4□□□□□ -1.7
UBE3A-202ENST00000397954 CHURC1Q8WUH1 139 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 PLD4Q96BZ4 506 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 PHACTR1Q9C0D0 580 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 VCPKMTQ9H867 229 aa4.4□□□□□ -1.7
UBE3A-202ENST00000397954 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.4□□□□□ -1.7
UBE3A-202ENST00000397954 MYH6P13533 1939 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 KIAA1217Q5T5P2 1943 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 ADD1P35611 737 aaKnown RBP4.4□□□□□ -1.71
UBE3A-202ENST00000397954 RGS2P41220 211 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 LACTBP83111 547 aaPredicted RBP4.4□□□□□ -1.71
UBE3A-202ENST00000397954 GRM2Q14416 872 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 TLR1Q15399 786 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 RTN1Q16799 776 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 PCNX4Q63HM2 1172 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 XRRA1Q6P2D8 792 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 CATSPERGQ6ZRH7 1159 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 KLHDC4Q8TBB5 520 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 BRI3BPQ8WY22 251 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 CEP89Q96ST8 783 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 TMEM39BQ9GZU3 492 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 TNKS2Q9H2K2 1166 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 TMEM63CQ9P1W3 806 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 SRRDQ9UH36 339 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 EXOC6BQ9Y2D4 811 aa4.4□□□□□ -1.71
UBE3A-202ENST00000397954 POTEB2H3BUK9 544 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 NKRFO15226 690 aaKnown RBP eCLIP4.39□□□□□ -1.712e-13■■□□□ 11.6
UBE3A-202ENST00000397954 PDPK1O15530 556 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 LILRA1O75019 489 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 IDH1O75874 414 aaKnown RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 ASMTLO95671 621 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 TTLL1O95922 423 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 EGFRP00533 1210 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 SHMT1P34896 483 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 GNAQP50148 359 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 EXOSC10Q01780 885 aaKnown RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 ASPRV1Q53RT3 343 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 TTC22Q5TAA0 569 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 RIOX2Q8IUF8 465 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 ZNF384Q8TF68 577 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 SLC39A13Q96H72 371 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 TMEM74Q96NL1 305 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 APBA2Q99767 749 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 TSEN34Q9BSV6 310 aaKnown RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 TCEAL9Q9UHQ7 104 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 FCF1Q9Y324 198 aaKnown RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 TANC1Q9C0D5 1861 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 CLRN2A0PK11 232 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 UBE2Q2LH0YL09 131 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 PDHXO00330 501 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 GOLIM4O00461 696 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 GPAA1O43292 621 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 KPNA6O60684 536 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 HMGCRP04035 888 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 NEFLP07196 543 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 PCSK2P16519 638 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 IRX3P78415 501 aaPredicted RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 SART3Q15020 963 aaKnown RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 ZFYVE27Q5T4F4 411 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 KCNV1Q6PIU1 500 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 TTC16Q8NEE8 873 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 GPRC5AQ8NFJ5 357 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 RSPH1Q8WYR4 309 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 ESR2Q92731 530 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 USP6NLQ92738 828 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 CRBNQ96SW2 442 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 FSD1Q9BTV5 496 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 NOC4LQ9BVI4 516 aaKnown RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 SRRTQ9BXP5 876 aaKnown RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 NAPBQ9H115 298 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 ALDH8A1Q9H2A2 487 aaPredicted RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 ELP3Q9H9T3 547 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 EFCC1Q9HA90 598 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 AATFQ9NY61 560 aaKnown RBP eCLIP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 PTCH2Q9Y6C5 1203 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 SLC4A4Q9Y6R1 1079 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 LTBP2Q14767 1821 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 BTBD19C9JJ37 291 aa4.39□□□□□ -1.71
UBE3A-202ENST00000397954 GADD45BO75293 160 aaPredicted RBP4.39□□□□□ -1.71
UBE3A-202ENST00000397954 MBD4O95243 580 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms