RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 H0YGN5 161 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 HEXIM1O94992 359 aaKnown RBP12.64□□□□□ -0.39
PUM3-202ENST00000397885 GLI1P08151 1106 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 IL15P40933 162 aaPredicted RBP12.64□□□□□ -0.39
PUM3-202ENST00000397885 PIGWQ7Z7B1 504 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 NBPF15Q8N660 670 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 NCOA7Q8NI08 942 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 NOC3LQ8WTT2 800 aaKnown RBP12.64□□□□□ -0.39
PUM3-202ENST00000397885 SH2D4AQ9H788 454 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 EPB41L5Q9HCM4 733 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 WDR35Q9P2L0 1181 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 CTNNAL1Q9UBT7 734 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
PUM3-202ENST00000397885 NARFQ9UHQ1 456 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 NFS1Q9Y697 457 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 STK36Q9NRP7 1315 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 ATP5J2-PTCD1G3V325 749 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 H7C1D1 291 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 RNF113AO15541 343 aaKnown RBP12.63□□□□□ -0.39
PUM3-202ENST00000397885 ATP2C2O75185 946 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 CHGBP05060 677 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 MTMR3Q13615 1198 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 SPA17Q15506 151 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 GNPTABQ3T906 1256 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 ERMARDQ5T6L9 678 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 LMNTD2Q8IXW0 634 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 GBP7Q8N8V2 638 aaPredicted RBP12.63□□□□□ -0.39
PUM3-202ENST00000397885 TEKT4Q8WW24 435 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 WASF1Q92558 559 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 PAGE5Q96GU1 130 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 PLEKHG4BQ96PX9 1271 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 HINFPQ9BQA5 517 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 RBM12Q9NTZ6 932 aaKnown RBP12.63□□□□□ -0.39
PUM3-202ENST00000397885 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.39
PUM3-202ENST00000397885 TAB2Q9NYJ8 693 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 LRRC42Q9Y546 428 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 PCDHGA4Q9Y5G9 962 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 C10orf71Q711Q0 1435 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 MACROD2A1Z1Q3 448 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 ZSCAN9O15535 394 aaPredicted RBP12.63□□□□□ -0.39
PUM3-202ENST00000397885 MATR3P43243 847 aaKnown RBP eCLIP12.63□□□□□ -0.39
PUM3-202ENST00000397885 CASP7P55210 303 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 PPARAQ07869 468 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 PAK1Q13153 545 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 TBC1D1Q86TI0 1168 aaPredicted RBP12.63□□□□□ -0.39
PUM3-202ENST00000397885 ZNF507Q8TCN5 953 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 POLD4Q9HCU8 107 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 GPHNQ9NQX3 736 aaPredicted RBP12.63□□□□□ -0.39
PUM3-202ENST00000397885 CTNND2Q9UQB3 1225 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 MAST3O60307 1309 aa12.63□□□□□ -0.39
PUM3-202ENST00000397885 DPPA5A6NC42 116 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 IFIT1P09914 478 aaKnown RBP12.62□□□□□ -0.39
PUM3-202ENST00000397885 EEF1GP26641 437 aaKnown RBP12.62□□□□□ -0.39
PUM3-202ENST00000397885 MXRA7P84157 204 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 ZBED6P86452 979 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 GUCY2DQ02846 1103 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 CUL1Q13616 776 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 SAFBQ15424 915 aaKnown RBP eCLIP12.62□□□□□ -0.39
PUM3-202ENST00000397885 NUGGCQ68CJ6 796 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 TRPM8Q7Z2W7 1104 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 MIPOL1Q8TD10 442 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.62□□□□□ -0.39
PUM3-202ENST00000397885 FAM129AQ9BZQ8 928 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 FOXP1Q9H334 677 aaPredicted RBP12.62□□□□□ -0.39
PUM3-202ENST00000397885 TFR2Q9UP52 801 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 FAM163BP0C2L3 166 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 PYGBP11216 843 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 TM4SF1P30408 202 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 RANBP1P43487 201 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 DNM2P50570 870 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 METAP2P50579 478 aaKnown RBP eCLIP12.62□□□□□ -0.39
PUM3-202ENST00000397885 ZNF844Q08AG5 666 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 TAF11Q15544 211 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 ODF2Q5BJF6 829 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 FIGNQ5HY92 759 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 IFT81Q8WYA0 676 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 TTYH3Q9C0H2 523 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 ISCUQ9H1K1 167 aa12.62□□□□□ -0.39
PUM3-202ENST00000397885 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
PUM3-202ENST00000397885 KIAA1551Q9HCM1 1747 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 A0A1W2PQJ5 194 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 LCA5LO95447 670 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 ZFYP08048 801 aaPredicted RBP12.61□□□□□ -0.39
PUM3-202ENST00000397885 TMOD1P28289 359 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 TOB1P50616 345 aaPredicted RBP12.61□□□□□ -0.39
PUM3-202ENST00000397885 ATG9AQ7Z3C6 839 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 RALYLQ86SE5 291 aaKnown RBP12.61□□□□□ -0.39
PUM3-202ENST00000397885 CASKIN2Q8WXE0 1202 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 TBC1D5Q92609 795 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 IFT74Q96LB3 600 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 AIFM3Q96NN9 605 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 ZNF317Q96PQ6 595 aaPredicted RBP12.61□□□□□ -0.39
PUM3-202ENST00000397885 TRAPPC9Q96Q05 1148 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 XPO6Q96QU8 1125 aaKnown RBP12.61□□□□□ -0.39
PUM3-202ENST00000397885 PYM1Q9BRP8 204 aaKnown RBP12.61□□□□□ -0.39
PUM3-202ENST00000397885 TRIM4Q9C037 500 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 DUSP10Q9Y6W6 482 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 PHF20L1A8MW92 1017 aa12.61□□□□□ -0.39
PUM3-202ENST00000397885 CIAO1O76071 339 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms