RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MYH7BA7E2Y1 1941 aa18.81■□□□□ 0.6
CUX2-202ENST00000397643 MYH6P13533 1939 aa18.81■□□□□ 0.6
CUX2-202ENST00000397643 EIF3JO75822 258 aaKnown RBP18.81■□□□□ 0.6
CUX2-202ENST00000397643 LAMC2Q13753 1193 aa18.81■□□□□ 0.6
CUX2-202ENST00000397643 TICAM2Q86XR7 235 aa18.81■□□□□ 0.6
CUX2-202ENST00000397643 MCF2L2Q86YR7 1114 aa18.81■□□□□ 0.6
CUX2-202ENST00000397643 PNMA1Q8ND90 353 aa18.81■□□□□ 0.6
CUX2-202ENST00000397643 ESR2Q92731 530 aa18.81■□□□□ 0.6
CUX2-202ENST00000397643 INSL6Q9Y581 213 aa18.81■□□□□ 0.6
CUX2-202ENST00000397643 MRVI1Q9Y6F6 885 aa18.81■□□□□ 0.6
CUX2-202ENST00000397643 COL4A6Q14031 1691 aa18.8■□□□□ 0.6
CUX2-202ENST00000397643 PRR33A8MZF0 331 aa18.8■□□□□ 0.6
CUX2-202ENST00000397643 NR3C2P08235 984 aa18.8■□□□□ 0.6
CUX2-202ENST00000397643 GHRHRQ02643 423 aa18.8■□□□□ 0.6
CUX2-202ENST00000397643 ANKRD45Q5TZF3 282 aa18.8■□□□□ 0.6
CUX2-202ENST00000397643 ARHGEF16Q5VV41 709 aa18.8■□□□□ 0.6
CUX2-202ENST00000397643 PTCRAQ6ISU1 281 aaPredicted RBP18.8■□□□□ 0.6
CUX2-202ENST00000397643 SERINC5Q86VE9 423 aa18.8■□□□□ 0.6
CUX2-202ENST00000397643 FBXO22Q8NEZ5 403 aa18.8■□□□□ 0.6
CUX2-202ENST00000397643 NEK9Q8TD19 979 aa18.8■□□□□ 0.6
CUX2-202ENST00000397643 ANKS1AQ92625 1134 aa18.8■□□□□ 0.6
CUX2-202ENST00000397643 RNF41Q9H4P4 317 aaPredicted RBP18.8■□□□□ 0.6
CUX2-202ENST00000397643 EMSYQ7Z589 1322 aa18.79■□□□□ 0.6
CUX2-202ENST00000397643 GRXCR2A6NFK2 248 aa18.79■□□□□ 0.6
CUX2-202ENST00000397643 HOXC8P31273 242 aa18.79■□□□□ 0.6
CUX2-202ENST00000397643 HSD17B4P51659 736 aa18.79■□□□□ 0.6
CUX2-202ENST00000397643 HSDL1Q3SXM5 330 aa18.79■□□□□ 0.6
CUX2-202ENST00000397643 ASPRV1Q53RT3 343 aa18.79■□□□□ 0.6
CUX2-202ENST00000397643 MYSM1Q5VVJ2 828 aa18.79■□□□□ 0.6
CUX2-202ENST00000397643 DBF4BQ8NFT6 615 aa18.79■□□□□ 0.6
CUX2-202ENST00000397643 MRPL38Q96DV4 380 aaKnown RBP18.79■□□□□ 0.6
CUX2-202ENST00000397643 JMJD4Q9H9V9 463 aa18.79■□□□□ 0.6
CUX2-202ENST00000397643 MRPL11Q9Y3B7 192 aaKnown RBP18.79■□□□□ 0.6
CUX2-202ENST00000397643 COL19A1Q14993 1142 aa18.78■□□□□ 0.6
CUX2-202ENST00000397643 PLEKHG4Q58EX7 1191 aa18.78■□□□□ 0.6
CUX2-202ENST00000397643 FBXO11Q86XK2 927 aa18.78■□□□□ 0.6
CUX2-202ENST00000397643 DHX37Q8IY37 1157 aaKnown RBP18.78■□□□□ 0.6
CUX2-202ENST00000397643 MYOCDQ8IZQ8 938 aa18.78■□□□□ 0.6
CUX2-202ENST00000397643 ENAHQ8N8S7 591 aaPredicted RBP18.78■□□□□ 0.6
CUX2-202ENST00000397643 PDCD2LQ9BRP1 358 aa18.78■□□□□ 0.6
CUX2-202ENST00000397643 C16orf70Q9BSU1 422 aa18.78■□□□□ 0.6
CUX2-202ENST00000397643 OSBPL7Q9BZF2 842 aa18.78■□□□□ 0.6
CUX2-202ENST00000397643 MYO7AQ13402 2215 aa18.78■□□□□ 0.6
CUX2-202ENST00000397643 KDM4AO75164 1064 aa18.77■□□□□ 0.6
CUX2-202ENST00000397643 PPFIA4O75335 1185 aa18.77■□□□□ 0.6
CUX2-202ENST00000397643 CFBP00751 764 aa18.77■□□□□ 0.6
CUX2-202ENST00000397643 AMHP03971 560 aa18.77■□□□□ 0.6
CUX2-202ENST00000397643 SP2Q02086 613 aa18.77■□□□□ 0.6
CUX2-202ENST00000397643 EPC2Q52LR7 807 aa18.77■□□□□ 0.6
CUX2-202ENST00000397643 CELF3Q5SZQ8 465 aaKnown RBP18.77■□□□□ 0.6
CUX2-202ENST00000397643 IL31RAQ8NI17 732 aa18.77■□□□□ 0.6
CUX2-202ENST00000397643 RWDD1Q9H446 243 aaPredicted RBP18.77■□□□□ 0.6
CUX2-202ENST00000397643 KAT14Q9H8E8 782 aa18.77■□□□□ 0.6
CUX2-202ENST00000397643 ATG2AQ2TAZ0 1938 aa18.76■□□□□ 0.59
CUX2-202ENST00000397643 RSPH10B2B2RC85 870 aa18.76■□□□□ 0.59
CUX2-202ENST00000397643 H3BQ06 376 aaPredicted RBP18.76■□□□□ 0.59
CUX2-202ENST00000397643 SORBS3O60504 671 aa18.76■□□□□ 0.59
CUX2-202ENST00000397643 PPP1R11O60927 126 aaPredicted RBP18.76■□□□□ 0.59
CUX2-202ENST00000397643 GGPS1O95749 300 aa18.76■□□□□ 0.59
CUX2-202ENST00000397643 RSPH10BP0C881 870 aa18.76■□□□□ 0.59
CUX2-202ENST00000397643 UBA1P22314 1058 aaKnown RBP18.76■□□□□ 0.59
CUX2-202ENST00000397643 SSTR3P32745 418 aaPredicted RBP18.76■□□□□ 0.59
CUX2-202ENST00000397643 THPOP40225 353 aa18.76■□□□□ 0.59
CUX2-202ENST00000397643 NT5C2P49902 561 aa18.76■□□□□ 0.59
CUX2-202ENST00000397643 HDAC1Q13547 482 aaPredicted RBP18.76■□□□□ 0.59
CUX2-202ENST00000397643 STOX1Q6ZVD7 989 aa18.76■□□□□ 0.59
CUX2-202ENST00000397643 IQCA1Q86XH1 822 aa18.76■□□□□ 0.59
CUX2-202ENST00000397643 ZSCAN10Q96SZ4 725 aaPredicted RBP18.76■□□□□ 0.59
CUX2-202ENST00000397643 NLRC5Q86WI3 1866 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 H3BNC9 293 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 PARP1P09874 1014 aaKnown RBP18.75■□□□□ 0.59
CUX2-202ENST00000397643 TIGD5Q53EQ6 642 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 ALYREFQ86V81 257 aaKnown RBP18.75■□□□□ 0.59
CUX2-202ENST00000397643 VSIG10LQ86VR7 867 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 STAG2Q8N3U4 1231 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 BANK1Q8NDB2 785 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 GPKOWQ92917 476 aaPredicted RBP eCLIP18.75■□□□□ 0.59
CUX2-202ENST00000397643 TOP1MTQ969P6 601 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 MTMR8Q96EF0 704 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 SPATA33Q96N06 139 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 SAMD11Q96NU1 681 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 VAT1LQ9HCJ6 419 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 ZNF318Q5VUA4 2279 aa18.75■□□□□ 0.59
CUX2-202ENST00000397643 WDFY4Q6ZS81 3184 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.74■□□□□ 0.59
CUX2-202ENST00000397643 POTEB3A0JP26 581 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 B4E1Z4 1266 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 ZNF213O14771 459 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 MYCLP12524 364 aaPredicted RBP18.74■□□□□ 0.59
CUX2-202ENST00000397643 ALADP13716 330 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 PGM5Q15124 567 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 PTPROQ16827 1216 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 PUS10Q3MIT2 529 aaKnown RBP18.74■□□□□ 0.59
CUX2-202ENST00000397643 CCDC178Q5BJE1 867 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 TCEAL5Q5H9L2 206 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 POTEBQ6S5H4 581 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 PABPC5Q96DU9 382 aaKnown RBP18.74■□□□□ 0.59
CUX2-202ENST00000397643 AMNQ9BXJ7 453 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 CTNNA3Q9UI47 895 aa18.74■□□□□ 0.59
CUX2-202ENST00000397643 RALGAPA2Q2PPJ7 1873 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms