RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CYP26C1Q6V0L0 522 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 GPC2Q8N158 579 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 CHST13Q8NET6 341 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 ZNF341Q9BYN7 854 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 SYT2Q8N9I0 419 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 DNERQ8NFT8 737 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 TMEM206Q9H813 350 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 SSC5DA1L4H1 1573 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 EIF3CLB5ME19 914 aaKnown RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 GCOM1H8Y6P7 765 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 LCA5LO95447 670 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 POLR2MP0CAP2 368 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 CYP2D6P10635 497 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 GUCY1B3Q02153 619 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 TTC39CQ8N584 583 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 SHCBP1Q8NEM2 672 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 ATP6V0A1Q93050 837 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 EIF3CQ99613 913 aaKnown RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 MMTAG2Q9BU76 263 aaKnown RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 ZSWIM4Q9H7M6 989 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 PRR12Q9ULL5 1215 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 USP17L5A8MUK1 530 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 MEIS2O14770 477 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 SLU7O95391 586 aaKnown RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 CXCL9Q07325 125 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 FOXD4L5Q5VV16 416 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 TRIM59Q8IWR1 403 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 ADGRF4Q8IZF3 695 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 FOXD4L4Q8WXT5 416 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 BLOC1S4Q9NUP1 217 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 SLC45A1Q9Y2W3 748 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 IRF6O14896 467 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 TPD52L1Q16890 204 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 ENOSF1Q7L5Y1 443 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 RRAGDQ9NQL2 400 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 TYW1Q9NV66 732 aaKnown RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 WDR81Q562E7 1941 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 CYP2D7A0A087X1C5 515 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 EEF2P13639 858 aaKnown RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 COPB1P53618 953 aaKnown RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 PROCA1Q8NCQ7 364 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 DRC1Q96MC2 740 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 EFCAB8A8MWE9 144 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 FAM47AQ5JRC9 791 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 LRRC55Q6ZSA7 311 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 ZNF507Q8TCN5 953 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 SNX29Q8TEQ0 813 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 FAM167AQ96KS9 214 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 TTYH3Q9C0H2 523 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 DDX25Q9UHL0 483 aaKnown RBP6.5□□□□□ -1.37
PTPRD-206ENST00000397617 SCN4AP35499 1836 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 PJA2O43164 708 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 HSPA6P17066 643 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 PLCG1P19174 1290 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 AOC3Q16853 763 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 KIAA0825Q8IV33 1275 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 CSGALNACT2Q8N6G5 542 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 OXER1Q8TDS5 423 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 DNAJC19Q96DA6 116 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 PIGSQ96S52 555 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 HOXC10Q9NYD6 342 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 CNTNAP1P78357 1384 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 MAPK8IP2Q13387 824 aaPredicted RBP6.5□□□□□ -1.37
PTPRD-206ENST00000397617 CEP135Q66GS9 1140 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 C1orf131Q8NDD1 294 aaKnown RBP6.5□□□□□ -1.37
PTPRD-206ENST00000397617 RAD54LQ92698 747 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 DHX58Q96C10 678 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 LARP6Q9BRS8 491 aaKnown RBP6.5□□□□□ -1.37
PTPRD-206ENST00000397617 ASIC1P78348 528 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 CAMK4Q16566 473 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 GNPTABQ3T906 1256 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 ANKRD23Q86SG2 305 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 FTOQ9C0B1 505 aaKnown RBP eCLIP6.5□□□□□ -1.37
PTPRD-206ENST00000397617 ZMYM2Q9UBW7 1377 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 USO1O60763 962 aaKnown RBP6.5□□□□□ -1.37
PTPRD-206ENST00000397617 TCP1P17987 556 aaKnown RBP6.5□□□□□ -1.37
PTPRD-206ENST00000397617 ICAM3P32942 547 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 TMEM139Q8IV31 216 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 C4orf19Q8IY42 314 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 CEP112Q8N8E3 955 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 SLC44A5Q8NCS7 719 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 HAS1Q92839 578 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 DYNLL2Q96FJ2 89 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 KIF5CO60282 957 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 GTF2H1P32780 548 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 WHAMMP3Q1A5X7 153 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 LETM2Q2VYF4 491 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 USP17L2Q6R6M4 530 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 STAG2Q8N3U4 1231 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 TC2NQ8N9U0 490 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 EPSTI1Q96J88 318 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 TRIM47Q96LD4 638 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 KAT6AQ92794 2004 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 USP17L10C9JJH3 530 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 SLC25A27O95847 323 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 GBP1P32455 592 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 CKAP4Q07065 602 aaKnown RBP6.5□□□□□ -1.37
PTPRD-206ENST00000397617 TCP11X2Q5H9J9 407 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 NLRX1Q86UT6 975 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms