RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 PSMC4P43686 418 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 RASA3Q14644 834 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 MAN2A1Q16706 1144 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 KCTD1Q719H9 257 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 CTAGE3PQ8IX95 158 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 VPS52Q8N1B4 723 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 TCP11Q8WWU5 503 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 IQCDQ96DY2 449 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 BCS1LQ9Y276 419 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 KIF11P52732 1056 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 PDCLQ13371 301 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 NNTQ13423 1086 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 CLUL1Q15846 466 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 CFAP157Q5JU67 520 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 MB21D2Q8IYB1 491 aaPredicted RBP11.77□□□□□ -0.53
CCDC40-204ENST00000397545 AP1M1Q9BXS5 423 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 HOMER3Q9NSC5 361 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 NFU1Q9UMS0 254 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 CD2APQ9Y5K6 639 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 GJA3Q9Y6H8 435 aa11.77□□□□□ -0.53
CCDC40-204ENST00000397545 FOXP2O15409 715 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 PRPF3O43395 683 aaKnown RBP11.76□□□□□ -0.53
CCDC40-204ENST00000397545 EPHB4P54760 987 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 TRPC3Q13507 836 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 ITPK1Q13572 414 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 TNS2Q63HR2 1409 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 TRIM68Q6AZZ1 485 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 FUCA2Q9BTY2 467 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 NDST4Q9H3R1 872 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 JRKLQ9Y4A0 524 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 ADGRG1Q9Y653 693 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 PP2D1A8MPX8 630 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 GUCY1A2P33402 732 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 PRKG1Q13976 671 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 FYB2Q5VWT5 728 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 MB21D1Q8N884 522 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 MARCH10Q8NA82 808 aaPredicted RBP11.76□□□□□ -0.53
CCDC40-204ENST00000397545 PKD1L3Q7Z443 1732 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 KDM3AQ9Y4C1 1321 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 BCL9O00512 1426 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 ESYT3A0FGR9 886 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 EN1Q05925 392 aaPredicted RBP11.76□□□□□ -0.53
CCDC40-204ENST00000397545 BSPRYQ5W0U4 402 aa11.76□□□□□ -0.53
CCDC40-204ENST00000397545 SREK1Q8WXA9 508 aaKnown RBP11.76□□□□□ -0.53
CCDC40-204ENST00000397545 SRP68Q9UHB9 627 aaKnown RBP11.76□□□□□ -0.53
CCDC40-204ENST00000397545 CRYBG1Q9Y4K1 1723 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
CCDC40-204ENST00000397545 ATF7P17544 494 aaPredicted RBP11.75□□□□□ -0.53
CCDC40-204ENST00000397545 PRCPP42785 496 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 DHX9Q08211 1270 aaKnown RBP11.75□□□□□ -0.53
CCDC40-204ENST00000397545 ODR4Q5SWX8 454 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 ANKRD20A3Q5VUR7 823 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 USP49Q70CQ1 688 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 WTIPA6NIX2 430 aaPredicted RBP11.75□□□□□ -0.53
CCDC40-204ENST00000397545 ERVV-1B6SEH8 477 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 KRT19P08727 400 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 CCZ1BP86790 482 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 CCZ1P86791 482 aaPredicted RBP11.75□□□□□ -0.53
CCDC40-204ENST00000397545 UBE2SQ16763 222 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 SLFN13Q68D06 897 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 ZNF34Q8IZ26 560 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 NKX2-3Q8TAU0 364 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 TBC1D22AQ8WUA7 517 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 GPR101Q96P66 508 aaPredicted RBP11.75□□□□□ -0.53
CCDC40-204ENST00000397545 INTS9Q9NV88 658 aaKnown RBP11.75□□□□□ -0.53
CCDC40-204ENST00000397545 PCDHA13Q9Y5I0 950 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 CTNND1O60716 968 aaKnown RBP11.75□□□□□ -0.53
CCDC40-204ENST00000397545 GFPT2O94808 682 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 ZBTB7AO95365 584 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 STRN3Q13033 797 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 PSMD6Q15008 389 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 ERFEQ4G0M1 354 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 GALNT17Q6IS24 598 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 RETREG2Q8NC44 543 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 ABHD10Q9NUJ1 306 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 RIC1Q4ADV7 1423 aa11.75□□□□□ -0.53
CCDC40-204ENST00000397545 PARP4Q9UKK3 1724 aaKnown RBP11.75□□□□□ -0.53
CCDC40-204ENST00000397545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.74□□□□□ -0.53
CCDC40-204ENST00000397545 TTC26A0AVF1 554 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 FAM205CA6NFA0 338 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 K7ENM7 598 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 THAP12O43422 761 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 KAZNQ674X7 775 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 PHLDB2Q86SQ0 1253 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 TEKT1Q969V4 418 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 PLCB1Q9NQ66 1216 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 DISC1Q9NRI5 854 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 KLHL14Q9P2G3 628 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 NOVA2Q9UNW9 492 aaKnown RBP11.74□□□□□ -0.53
CCDC40-204ENST00000397545 EXOC7Q9UPT5 735 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
CCDC40-204ENST00000397545 UBE2Q2LH0YL09 131 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 HMGB2P26583 209 aaKnown RBP11.74□□□□□ -0.53
CCDC40-204ENST00000397545 PEX19P40855 299 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 SESN3P58005 492 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 SNX1Q13596 522 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 FAM102BQ5T8I3 360 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 CASC4Q6P4E1 433 aa11.74□□□□□ -0.53
CCDC40-204ENST00000397545 INTS5Q6P9B9 1019 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms