RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 JADE2Q9NQC1 790 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 LRWD1Q9UFC0 647 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 HPSEQ9Y251 543 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 DDX39AO00148 427 aaKnown RBP23.9■■□□□ 1.42
CPNE1-204ENST00000397443 POLR2DO15514 142 aaKnown RBP23.9■■□□□ 1.42
CPNE1-204ENST00000397443 COBLO75128 1261 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 ZNF202O95125 648 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 TBC1D8O95759 1140 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 ALDH1A1P00352 501 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 FXR2P51116 673 aaKnown RBP eCLIP23.9■■□□□ 1.422e-6■■■□□ 18.4
CPNE1-204ENST00000397443 STXBP2Q15833 593 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 IGSF22Q8N9C0 903 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 FAM20AQ96MK3 541 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 IWS1Q96ST2 819 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 PLIN2Q99541 437 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 DOCK3Q8IZD9 2030 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 A0A087X0B3 334 aa23.89■■□□□ 1.42
CPNE1-204ENST00000397443 TBX3O15119 743 aa23.89■■□□□ 1.42
CPNE1-204ENST00000397443 STRNO43815 780 aa23.89■■□□□ 1.42
CPNE1-204ENST00000397443 UBA7P41226 1012 aa23.89■■□□□ 1.42
CPNE1-204ENST00000397443 LRCH2Q5VUJ6 765 aa23.89■■□□□ 1.42
CPNE1-204ENST00000397443 XRRA1Q6P2D8 792 aa23.89■■□□□ 1.42
CPNE1-204ENST00000397443 DPP9Q86TI2 863 aa23.89■■□□□ 1.42
CPNE1-204ENST00000397443 RAB34Q9BZG1 259 aa23.89■■□□□ 1.42
CPNE1-204ENST00000397443 IPO5O00410 1097 aaKnown RBP23.88■■□□□ 1.41
CPNE1-204ENST00000397443 CHMP2AO43633 222 aa23.88■■□□□ 1.41
CPNE1-204ENST00000397443 RGS20O76081 388 aa23.88■■□□□ 1.41
CPNE1-204ENST00000397443 TXLNAP40222 546 aa23.88■■□□□ 1.41
CPNE1-204ENST00000397443 KARSQ15046 597 aaKnown RBP23.88■■□□□ 1.41
CPNE1-204ENST00000397443 SYAP1Q96A49 352 aaPredicted RBP23.88■■□□□ 1.41
CPNE1-204ENST00000397443 GAS7O60861 476 aa23.88■■□□□ 1.41
CPNE1-204ENST00000397443 NCAPH2Q6IBW4 605 aa23.88■■□□□ 1.41
CPNE1-204ENST00000397443 SEPT14Q6ZU15 432 aa23.88■■□□□ 1.41
CPNE1-204ENST00000397443 DHX58Q96C10 678 aa23.88■■□□□ 1.41
CPNE1-204ENST00000397443 DDX19AQ9NUU7 478 aaKnown RBP23.88■■□□□ 1.41
CPNE1-204ENST00000397443 MCM3APO60318 1980 aa23.88■■□□□ 1.41
CPNE1-204ENST00000397443 TRPA1O75762 1119 aa23.87■■□□□ 1.41
CPNE1-204ENST00000397443 GRB14Q14449 540 aa23.87■■□□□ 1.41
CPNE1-204ENST00000397443 CCDC183Q5T5S1 534 aa23.87■■□□□ 1.41
CPNE1-204ENST00000397443 NIPA1Q7RTP0 329 aa23.87■■□□□ 1.41
CPNE1-204ENST00000397443 NLRX1Q86UT6 975 aa23.87■■□□□ 1.41
CPNE1-204ENST00000397443 CABP7Q86V35 215 aa23.87■■□□□ 1.41
CPNE1-204ENST00000397443 SLC5A5Q92911 643 aa23.87■■□□□ 1.41
CPNE1-204ENST00000397443 AK8Q96MA6 479 aa23.87■■□□□ 1.41
CPNE1-204ENST00000397443 INPP4AQ96PE3 977 aaPredicted RBP23.87■■□□□ 1.41
CPNE1-204ENST00000397443 NUP62CLQ9H1M0 184 aa23.87■■□□□ 1.41
CPNE1-204ENST00000397443 AGO4Q9HCK5 861 aaKnown RBP23.87■■□□□ 1.41
CPNE1-204ENST00000397443 KIAA1217Q5T5P2 1943 aa23.87■■□□□ 1.41
CPNE1-204ENST00000397443 SORBS3O60504 671 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 LONRF3Q496Y0 759 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 ABRAQ8N0Z2 381 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 FAM237AA0A1B0GTK4 181 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 ATP9AO75110 1047 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 EIF3JO75822 258 aaKnown RBP23.86■■□□□ 1.41
CPNE1-204ENST00000397443 ITGB3BPQ13352 177 aaPredicted RBP23.86■■□□□ 1.41
CPNE1-204ENST00000397443 PDIA5Q14554 519 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 ZNF792Q3KQV3 632 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 SNX29Q8TEQ0 813 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 NUDT12Q9BQG2 462 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 SDF4Q9BRK5 362 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 VAV3Q9UKW4 847 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 PLXNA1Q9UIW2 1896 aa23.86■■□□□ 1.41
CPNE1-204ENST00000397443 PSMD10O75832 226 aa23.85■■□□□ 1.41
CPNE1-204ENST00000397443 EDNRBP24530 442 aa23.85■■□□□ 1.41
CPNE1-204ENST00000397443 SPIRE1Q08AE8 756 aa23.85■■□□□ 1.41
CPNE1-204ENST00000397443 SEMA3FQ13275 785 aa23.85■■□□□ 1.41
CPNE1-204ENST00000397443 GNPTABQ3T906 1256 aa23.85■■□□□ 1.41
CPNE1-204ENST00000397443 REM2Q8IYK8 340 aaPredicted RBP23.85■■□□□ 1.41
CPNE1-204ENST00000397443 GPRASP2Q96D09 838 aa23.85■■□□□ 1.41
CPNE1-204ENST00000397443 MPHOSPH6Q99547 160 aaKnown RBP23.85■■□□□ 1.41
CPNE1-204ENST00000397443 TNMDQ9H2S6 317 aa23.85■■□□□ 1.41
CPNE1-204ENST00000397443 CLSTN2Q9H4D0 955 aa23.85■■□□□ 1.41
CPNE1-204ENST00000397443 SERTAD1Q9UHV2 236 aa23.85■■□□□ 1.41
CPNE1-204ENST00000397443 B4DLN1 442 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 MAP2K2P36507 400 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 ZSCAN23Q3MJ62 389 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 CKAP2LQ8IYA6 745 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 ERCC4Q92889 916 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-204ENST00000397443 MMTAG2Q9BU76 263 aaKnown RBP23.84■■□□□ 1.41
CPNE1-204ENST00000397443 TEKT3Q9BXF9 490 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 SLC15A5A6NIM6 579 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 TNPO2O14787 897 aaKnown RBP23.84■■□□□ 1.41
CPNE1-204ENST00000397443 CTGFP29279 349 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 KRT79Q5XKE5 535 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 OTOP1Q7RTM1 612 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 CNNM3Q8NE01 707 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 ARHGAP39Q9C0H5 1083 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 UNC45AQ9H3U1 944 aa23.84■■□□□ 1.41
CPNE1-204ENST00000397443 SYCE3A1L190 88 aa23.83■■□□□ 1.41
CPNE1-204ENST00000397443 STAM2O75886 525 aa23.83■■□□□ 1.41
CPNE1-204ENST00000397443 ARMCX2Q7L311 632 aa23.83■■□□□ 1.41
CPNE1-204ENST00000397443 FBXO16Q8IX29 292 aaPredicted RBP23.83■■□□□ 1.41
CPNE1-204ENST00000397443 RNF186Q9NXI6 227 aa23.83■■□□□ 1.41
CPNE1-204ENST00000397443 EML1O00423 815 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 CCT6AP40227 531 aaKnown RBP23.82■■□□□ 1.4
CPNE1-204ENST00000397443 SP4Q02446 784 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 RRAGBQ5VZM2 374 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 KRBA2Q6ZNG9 492 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 NPLOC4Q8TAT6 608 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 CDK5RAP3Q96JB5 506 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms