RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 A0A1W2PQ27 194 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 A0A1W2PQ64 194 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 A0A1W2PQD8 194 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 FAM86B1E9PN63 330 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 IGHA2P01877 340 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 FAM86B2P0C5J1 330 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 EIF2AK2P19525 551 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 PRPHP41219 470 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 PGM5Q15124 567 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 Q4G0T1 1027 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 PCNX4Q63HM2 1172 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 DIS3LQ8TF46 1054 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 FERMT2Q96AC1 680 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 LENG9Q96B70 501 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 CLIC6Q96NY7 704 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 MMP19Q99542 508 aa19.18■□□□□ 0.66
TSPAN4-205ENST00000397406 DNAJC25-GNG10A0A024R161 153 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 GOLGA6L4A6NEF3 574 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 H0YGN5 161 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 OR52Z1P0C646 297 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 CNTN2Q02246 1040 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 IL17AQ16552 155 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 ARHGEF16Q5VV41 709 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 FAM133AQ8N9E0 248 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 NSUN6Q8TEA1 469 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 SOCS4Q8WXH5 440 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 ASTN1O14525 1302 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 FARP2O94887 1054 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 FCER1AP12319 257 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 MRPS9P82933 396 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 CACNB2Q08289 660 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 CALCRLQ16602 461 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 TPRNQ4KMQ1 711 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 WDR78Q5VTH9 848 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 ZNF579Q8NAF0 562 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 DNERQ8NFT8 737 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 NPLOC4Q8TAT6 608 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 CYP2W1Q8TAV3 490 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 KCNMB3Q9NPA1 279 aa19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 DDX49Q9Y6V7 483 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-205ENST00000397406 MCM3APO60318 1980 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 SOWAHBA6NEL2 793 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 POTEB2H3BUK9 544 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 TRAK2O60296 914 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 MBD3O95983 291 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 TFRCP02786 760 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 PRKAR2AP13861 404 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 CMA1P23946 247 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 ZNF76P36508 570 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 MAP2K5Q13163 448 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 GRB14Q14449 540 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 KCTD2Q14681 263 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 SKOR2Q2VWA4 1001 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 CEP55Q53EZ4 464 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 PRR16Q569H4 304 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 SHC4Q6S5L8 630 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 ETNPPLQ8TBG4 499 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 HAS1Q92839 578 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 CSRNP2Q9H175 543 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 UBIAD1Q9Y5Z9 338 aa19.16■□□□□ 0.66
TSPAN4-205ENST00000397406 VWA3AA6NCI4 1184 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 MEIS1O00470 390 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 NR3C2P08235 984 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 CCND3P30281 292 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 ALDH5A1P51649 535 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 KLHL40Q2TBA0 621 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 RESP18Q5W5W9 173 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 XRRA1Q6P2D8 792 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 DTHD1Q6ZMT9 781 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 NIPA1Q7RTP0 329 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 VSIG10LQ86VR7 867 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 CCAR1Q8IX12 1150 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 ABRAQ8N0Z2 381 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 MRPS27Q92552 414 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 ZFP91Q96JP5 570 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 FGD4Q96M96 766 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 APBA2Q99767 749 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 MXRA8Q9BRK3 442 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 GOLPH3LQ9H4A5 285 aa19.15■□□□□ 0.66
TSPAN4-205ENST00000397406 FAM237AA0A1B0GTK4 181 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 SLC15A5A6NIM6 579 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 TBX3O15119 743 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 STRNO43815 780 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 PGK2P07205 417 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 ITGB5P18084 799 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 LIG1P18858 919 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 CCND2P30279 289 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 RGS2P41220 211 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 LHX8Q68G74 356 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 FSIP1Q8NA03 581 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 PAWRQ96IZ0 340 aaKnown RBP19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 IWS1Q96ST2 819 aa19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 HMX1Q9NP08 348 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-205ENST00000397406 MSH4O15457 936 aa19.13■□□□□ 0.65
TSPAN4-205ENST00000397406 HOXC6P09630 235 aa19.13■□□□□ 0.65
TSPAN4-205ENST00000397406 MYCLP12524 364 aaPredicted RBP19.13■□□□□ 0.65
TSPAN4-205ENST00000397406 EDNRBP24530 442 aa19.13■□□□□ 0.65
TSPAN4-205ENST00000397406 LONP1P36776 959 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-205ENST00000397406 SETQ01105 290 aaPredicted RBP19.13■□□□□ 0.65
TSPAN4-205ENST00000397406 HABP4Q5JVS0 413 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms