RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PSMC4P43686 418 aa16.83■□□□□ 0.28
CAPN3-207ENST00000397200 LETM2Q2VYF4 491 aa16.83■□□□□ 0.28
CAPN3-207ENST00000397200 DPP9Q86TI2 863 aa16.83■□□□□ 0.28
CAPN3-207ENST00000397200 WBP1LQ9NX94 342 aa16.83■□□□□ 0.28
CAPN3-207ENST00000397200 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.83■□□□□ 0.28
CAPN3-207ENST00000397200 FRMPD4Q14CM0 1322 aa16.83■□□□□ 0.28
CAPN3-207ENST00000397200 CDC25BP30305 580 aa16.82■□□□□ 0.28
CAPN3-207ENST00000397200 USP11P51784 963 aa16.82■□□□□ 0.28
CAPN3-207ENST00000397200 NLRP12P59046 1061 aa16.82■□□□□ 0.28
CAPN3-207ENST00000397200 PGM5Q15124 567 aa16.82■□□□□ 0.28
CAPN3-207ENST00000397200 TTC38Q5R3I4 469 aa16.82■□□□□ 0.28
CAPN3-207ENST00000397200 MORN1Q5T089 497 aa16.82■□□□□ 0.28
CAPN3-207ENST00000397200 MPHOSPH6Q99547 160 aaKnown RBP16.82■□□□□ 0.28
CAPN3-207ENST00000397200 PDCD2LQ9BRP1 358 aa16.82■□□□□ 0.28
CAPN3-207ENST00000397200 ARHGAP39Q9C0H5 1083 aa16.82■□□□□ 0.28
CAPN3-207ENST00000397200 NAT10Q9H0A0 1025 aaKnown RBP16.82■□□□□ 0.28
CAPN3-207ENST00000397200 SLC5A4Q9NY91 659 aa16.82■□□□□ 0.28
CAPN3-207ENST00000397200 KCNH3Q9ULD8 1083 aa16.82■□□□□ 0.28
CAPN3-207ENST00000397200 SOWAHBA6NEL2 793 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 B4DLN1 442 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 COBLO75128 1261 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 TPM3P06753 285 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 CTGFP29279 349 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 ALDH5A1P51649 535 aaPredicted RBP16.81■□□□□ 0.28
CAPN3-207ENST00000397200 ZNF75DP51815 510 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 KRBA2Q6ZNG9 492 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 CRYGNQ8WXF5 182 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 SOCS4Q8WXH5 440 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 TRIM47Q96LD4 638 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 NAP1L4Q99733 375 aaKnown RBP16.81■□□□□ 0.28
CAPN3-207ENST00000397200 NUDT12Q9BQG2 462 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 CCNT1O60563 726 aaKnown RBP16.81■□□□□ 0.28
CAPN3-207ENST00000397200 FKTNO75072 461 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 CYP3A4P08684 503 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 CCND2P30279 289 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 ZNF76P36508 570 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 GRIN1Q05586 938 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 MAP2K5Q13163 448 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 ZNF792Q3KQV3 632 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 DPCR1Q3MIW9 517 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 PCNX4Q63HM2 1172 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 IL31RAQ8NI17 732 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 IWS1Q96ST2 819 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 TSKSQ9UJT2 592 aa16.81■□□□□ 0.28
CAPN3-207ENST00000397200 ASTN1O14525 1302 aa16.8■□□□□ 0.28
CAPN3-207ENST00000397200 GOLGA6L19H0YKK7 550 aa16.8■□□□□ 0.28
CAPN3-207ENST00000397200 NR3C2P08235 984 aa16.8■□□□□ 0.28
CAPN3-207ENST00000397200 MYCLP12524 364 aaPredicted RBP16.8■□□□□ 0.28
CAPN3-207ENST00000397200 GCFC2P16383 781 aaKnown RBP16.8■□□□□ 0.28
CAPN3-207ENST00000397200 RGS2P41220 211 aa16.8■□□□□ 0.28
CAPN3-207ENST00000397200 ZNF174Q15697 407 aa16.8■□□□□ 0.28
CAPN3-207ENST00000397200 XRRA1Q6P2D8 792 aa16.8■□□□□ 0.28
CAPN3-207ENST00000397200 CD99L2Q8TCZ2 262 aa16.8■□□□□ 0.28
CAPN3-207ENST00000397200 ERCC4Q92889 916 aaPredicted RBP16.8■□□□□ 0.28
CAPN3-207ENST00000397200 FERMT2Q96AC1 680 aa16.8■□□□□ 0.28
CAPN3-207ENST00000397200 ERO1AQ96HE7 468 aa16.8■□□□□ 0.28
CAPN3-207ENST00000397200 FGD4Q96M96 766 aa16.8■□□□□ 0.28
CAPN3-207ENST00000397200 FAM13BQ9NYF5 915 aa16.8■□□□□ 0.28
CAPN3-207ENST00000397200 DIS3Q9Y2L1 958 aaKnown RBP16.8■□□□□ 0.28
CAPN3-207ENST00000397200 LOC102724159A0A0B4J2E5 919 aa16.79■□□□□ 0.28
CAPN3-207ENST00000397200 WNT7AO00755 349 aa16.79■□□□□ 0.28
CAPN3-207ENST00000397200 EDIL3O43854 480 aa16.79■□□□□ 0.28
CAPN3-207ENST00000397200 MCM7P33993 719 aa16.79■□□□□ 0.28
CAPN3-207ENST00000397200 ATP2C1P98194 919 aaPredicted RBP16.79■□□□□ 0.28
CAPN3-207ENST00000397200 MDM2Q00987 491 aaPredicted RBP16.79■□□□□ 0.28
CAPN3-207ENST00000397200 PWP2Q15269 919 aaKnown RBP16.79■□□□□ 0.28
CAPN3-207ENST00000397200 LONRF3Q496Y0 759 aa16.79■□□□□ 0.28
CAPN3-207ENST00000397200 PPP4R3AQ6IN85 833 aa16.79■□□□□ 0.28
CAPN3-207ENST00000397200 MOXD1Q6UVY6 613 aa16.79■□□□□ 0.28
CAPN3-207ENST00000397200 ZNF296Q8WUU4 475 aaPredicted RBP16.79■□□□□ 0.28
CAPN3-207ENST00000397200 MRFAP1L1Q96HT8 127 aa16.79■□□□□ 0.28
CAPN3-207ENST00000397200 GJD2Q9UKL4 321 aa16.79■□□□□ 0.28
CAPN3-207ENST00000397200 PCNTO95613 3336 aa16.79■□□□□ 0.28
CAPN3-207ENST00000397200 LRRC37A2A6NM11 1700 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 A0A087WWV3 80 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 ASB14A6NK59 587 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 GOLGA6L6A8MZA4 724 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 TDP2O95551 362 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 CIITAP33076 1130 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 PDE4DQ08499 809 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 ORC2Q13416 577 aaPredicted RBP16.78■□□□□ 0.28
CAPN3-207ENST00000397200 ARHGEF6Q15052 776 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 STXBP2Q15833 593 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 ZNF467Q7Z7K2 595 aaPredicted RBP16.78■□□□□ 0.28
CAPN3-207ENST00000397200 VSIG10LQ86VR7 867 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 USP6NLQ92738 828 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 APBA2Q99767 749 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 DDX25Q9UHL0 483 aaKnown RBP16.78■□□□□ 0.28
CAPN3-207ENST00000397200 MCM3APO60318 1980 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 CYP3A7-CYP3A51PA0A087WV96 503 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 STAM2O75886 525 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 HOXC6P09630 235 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 CYP2B6P20813 491 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 CYP3A7P24462 503 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 EDNRBP24530 442 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 HOXD10P28358 340 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 MRPS9P82933 396 aaKnown RBP16.78■□□□□ 0.28
CAPN3-207ENST00000397200 PLCB2Q00722 1185 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 CEP55Q53EZ4 464 aa16.78■□□□□ 0.28
CAPN3-207ENST00000397200 NT5DC1Q5TFE4 455 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms