RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 OR52Z1P0C646 297 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 TECP42680 631 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 PTGISQ16647 500 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 ACCSLQ4AC99 568 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 CAVIN4Q5BKX8 364 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 NLRP14Q86W24 1093 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 CCT8L2Q96SF2 557 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 CRNKL1Q9BZJ0 848 aaKnown RBP10.1□□□□□ -0.79
CAPN3-206ENST00000397163 DCP1AQ9NPI6 582 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-206ENST00000397163 NLRC4Q9NPP4 1024 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 RNF14Q9UBS8 474 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 ATXN2Q99700 1313 aaKnown RBP10.1□□□□□ -0.79
CAPN3-206ENST00000397163 GOLGA6L10A6NI86 522 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 ENO4A6NNW6 628 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 E7EVH7 732 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 PJA2O43164 708 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 CCNT1O60563 726 aaKnown RBP10.1□□□□□ -0.79
CAPN3-206ENST00000397163 PALMO75781 387 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 FGFR1OPO95684 399 aaKnown RBP10.1□□□□□ -0.79
CAPN3-206ENST00000397163 IL6STP40189 918 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-206ENST00000397163 HLTFQ14527 1009 aaKnown RBP eCLIP10.1□□□□□ -0.79
CAPN3-206ENST00000397163 SNCBQ16143 134 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 PNMA1Q8ND90 353 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 ATP6V1G3Q96LB4 118 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 AK8Q96MA6 479 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 VCPKMTQ9H867 229 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 PAPPAQ13219 1627 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 FLT1P17948 1338 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 PLCH1Q4KWH8 1693 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 MYBL1P10243 752 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 MDH1P40925 334 aaKnown RBP10.09□□□□□ -0.79
CAPN3-206ENST00000397163 PRPHP41219 470 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 TFAP4Q01664 338 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 ARMC3Q5W041 872 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 CENPPQ6IPU0 288 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 RCSD1Q6JBY9 416 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 PDXDC1Q6P996 788 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 RNF10Q8N5U6 811 aaKnown RBP10.09□□□□□ -0.79
CAPN3-206ENST00000397163 CASKIN2Q8WXE0 1202 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 CALML4Q96GE6 196 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 A1CFQ9NQ94 594 aaKnown RBP10.09□□□□□ -0.79
CAPN3-206ENST00000397163 NRAPQ86VF7 1730 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 DOCK2Q92608 1830 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 MYH13Q9UKX3 1938 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 BCORQ6W2J9 1755 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 A0A0G2JS52 829 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 AP1G2O75843 785 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 ENOX2Q16206 610 aaKnown RBP10.09□□□□□ -0.79
CAPN3-206ENST00000397163 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
CAPN3-206ENST00000397163 DYMQ7RTS9 669 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 KLHL7Q8IXQ5 586 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 MYCBPAPQ8TBZ2 947 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 PARD3BQ8TEW8 1205 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 BAP1Q92560 729 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 LUC7LQ9NQ29 371 aaKnown RBP10.09□□□□□ -0.79
CAPN3-206ENST00000397163 USP21Q9UK80 565 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 COL5A2P05997 1499 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-206ENST00000397163 HMGB1P1B2RPK0 211 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-206ENST00000397163 M0R2N6 131 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 UPP2O95045 317 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 GNAQP50148 359 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 EHHADHQ08426 723 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 TRADDQ15628 312 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 SLC9C1Q4G0N8 1177 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 CYB5D1Q6P9G0 228 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 SV2BQ7L1I2 683 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 PARP9Q8IXQ6 854 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 WHAMMQ8TF30 809 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 ZNF384Q8TF68 577 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 TBC1D22AQ8WUA7 517 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 MCM9Q9NXL9 1143 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 TPX2Q9ULW0 747 aaKnown RBP10.09□□□□□ -0.79
CAPN3-206ENST00000397163 PACSIN2Q9UNF0 486 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-206ENST00000397163 PLAAQ9Y263 795 aa10.09□□□□□ -0.79
CAPN3-206ENST00000397163 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.08□□□□□ -0.8
CAPN3-206ENST00000397163 MYH10P35580 1976 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 ZNF804BA4D1E1 1349 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 RASSF9O75901 435 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 MYH3P11055 1940 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 GALNT17Q6IS24 598 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 CD302Q8IX05 232 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 ZBTB10Q96DT7 871 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 SPDL1Q96EA4 605 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 THOC1Q96FV9 657 aaKnown RBP10.08□□□□□ -0.8
CAPN3-206ENST00000397163 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.08□□□□□ -0.8
CAPN3-206ENST00000397163 LRP5O75197 1615 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 GOLGA6L7A0A1B0GV03 622 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 SSU72P8A0A1W2PR75 194 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 EZRP15311 586 aaKnown RBP10.08□□□□□ -0.8
CAPN3-206ENST00000397163 NAPAP54920 295 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 TNNC1P63316 161 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 ARID5AQ03989 594 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 SFMBT2Q5VUG0 894 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 YTHDF3Q7Z739 585 aaKnown RBP10.08□□□□□ -0.8
CAPN3-206ENST00000397163 FMNL3Q8IVF7 1028 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 MREGQ8N565 214 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 ARFGAP2Q8N6H7 521 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 CDK5RAP3Q96JB5 506 aa10.08□□□□□ -0.8
CAPN3-206ENST00000397163 NIP7Q9Y221 180 aaKnown RBP eCLIP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms