RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 UBXN2AP68543 259 aa17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 ALX1Q15699 326 aa17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 ODR4Q5SWX8 454 aa17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 PPP1R21Q6ZMI0 780 aa17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 TMC4Q7Z404 712 aa17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 DNAJC17Q9NVM6 304 aaKnown RBP17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 GCNT4Q9P109 453 aa17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 CPDO75976 1380 aa17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 ATP2C1P98194 919 aaPredicted RBP17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 GUCY1A3Q02108 690 aa17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 TSNAXIP1Q2TAA8 658 aa17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 RNF10Q8N5U6 811 aaKnown RBP17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 KIFC2Q96AC6 838 aa17.25■□□□□ 0.35
ATP2A3-205ENST00000397041 FMO2Q99518 471 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 TBK1Q9UHD2 729 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 TMEM94Q12767 1356 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 ACTN3Q08043 901 aaPredicted RBP17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 NCAPHQ15003 741 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 ANKRD20A3Q5VUR7 823 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 OTUD6AQ7L8S5 288 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 DDX47Q9H0S4 455 aaKnown RBP17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 RABGAP1Q9Y3P9 1069 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 HMGB1P1B2RPK0 211 aaPredicted RBP17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 PRPF6O94906 941 aaKnown RBP17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 FGGP02679 453 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 CCDC38Q502W7 563 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 FAM186BQ8IYM0 893 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 K7ENM7 598 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 LRRC63Q05C16 580 aa17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 APBB1IPQ7Z5R6 666 aaPredicted RBP17.24■□□□□ 0.35
ATP2A3-205ENST00000397041 PLA2G4BP0C869 781 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 DPYDQ12882 1025 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 CLUL1Q15846 466 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 ANKRD40Q6AI12 368 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 SLFN12Q8IYM2 578 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 SRBD1Q8N5C6 995 aaKnown RBP17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 BANK1Q8NDB2 785 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 KLHL29Q96CT2 875 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 CAPN11Q9UMQ6 739 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 DLATP10515 647 aaKnown RBP17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 FERP16591 822 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 TNNI1P19237 187 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 TBC1D1Q86TI0 1168 aaPredicted RBP17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 MS4A14Q96JA4 679 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 GPR101Q96P66 508 aaPredicted RBP17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 MAK16Q9BXY0 300 aaKnown RBP17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 TXNDC16Q9P2K2 825 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 LIMA1Q9UHB6 759 aaKnown RBP17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 SFI1A8K8P3 1242 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 SUN1O94901 812 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 ATF7P17544 494 aaPredicted RBP17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 FAM83BQ5T0W9 1011 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 SPICE1Q8N0Z3 855 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 TBC1D22AQ8WUA7 517 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 N4BP2L2Q92802 583 aaPredicted RBP17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 NEXMIFQ5QGS0 1516 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 PTPAQ15257 358 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 CYP4F22Q6NT55 531 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 NSMFQ6X4W1 530 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 PBKQ96KB5 322 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 BRIP1Q9BX63 1249 aa17.23■□□□□ 0.35
ATP2A3-205ENST00000397041 POC1B-GALNT4F8VUJ3 575 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 FBXW10Q5XX13 1052 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 SLFN13Q68D06 897 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 DGKHQ86XP1 1220 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 PASKQ96RG2 1323 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 INO80Q9ULG1 1556 aaPredicted RBP17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 LMNB1P20700 586 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 GUCY2CP25092 1073 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 TRIP13Q15645 432 aaPredicted RBP17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 CCDC62Q6P9F0 684 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 STAG2Q8N3U4 1231 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 TTC16Q8NEE8 873 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 TSNARE1Q96NA8 513 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 ELAC2Q9BQ52 826 aaKnown RBP17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 SNX24Q9Y343 169 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 CD19P15391 556 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 HSPA1LP34931 641 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 DOK7Q18PE1 504 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 KAZNQ674X7 775 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 UNC13DQ70J99 1090 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 FBXO11Q86XK2 927 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 DCP1AQ9NPI6 582 aaPredicted RBP17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 PXDNLA1KZ92 1463 aa17.22■□□□□ 0.35
ATP2A3-205ENST00000397041 CIB2O75838 187 aa17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 SARNPP82979 210 aaKnown RBP17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 PHLDB2Q86SQ0 1253 aa17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 KIAA0825Q8IV33 1275 aa17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 PROCA1Q8NCQ7 364 aaPredicted RBP17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 NEK9Q8TD19 979 aa17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 PCIF1Q9H4Z3 704 aa17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 ARHGEF10LQ9HCE6 1279 aa17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 EXOC7Q9UPT5 735 aa17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 MAGOHP61326 146 aaKnown RBP17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 TMEM47Q9BQJ4 181 aa17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 FERMT1Q9BQL6 677 aa17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 TMEM260Q9NX78 707 aa17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 SNX12Q9UMY4 172 aa17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 TFRCP02786 760 aaKnown RBP17.21■□□□□ 0.35
ATP2A3-205ENST00000397041 CTAGE3PQ8IX95 158 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms