RNA–Protein interactions for RNA: ENST00000397035.7

ATP2A3-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-204ENST00000397035 CCDC169A6NNP5 214 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 RNF225M0QZC1 329 aaPredicted RBP16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 PDE2AO00408 941 aaPredicted RBP16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 CYP2J2P51589 502 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 EXOC3L4Q17RC7 722 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 CCDC38Q502W7 563 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 EP400NLQ6ZTU2 488 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 SYCE1Q8N0S2 351 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 GEMIN8Q9NWZ8 242 aaKnown RBP16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 ARPP21Q9UBL0 812 aaPredicted RBP16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 COL4A3BPQ9Y5P4 624 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 A0A1W2PQC6 194 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 CLIC2O15247 247 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 GFPT2O94808 682 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 FGGP02679 453 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 MKRN4PQ13434 485 aaPredicted RBP16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 COA7Q96BR5 231 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 IQCDQ96DY2 449 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 PLCB1Q9NQ66 1216 aa16.55■□□□□ 0.24
ATP2A3-204ENST00000397035 KIDINS220Q9ULH0 1771 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 SRGNP10124 158 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 ZNF211Q13398 564 aaPredicted RBP16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 CDKAL1Q5VV42 579 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 ALKBH5Q6P6C2 394 aaKnown RBP16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 CUL5Q93034 780 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 YIPF3Q9GZM5 350 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 HSD3B7Q9H2F3 369 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 SLC40A1Q9NP59 571 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 HOMER3Q9NSC5 361 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 LRRN2O75325 713 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 TMEM132AQ24JP5 1023 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 UBL4BQ8N7F7 174 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 LBHD1Q9BQE6 289 aaPredicted RBP16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 KLHL14Q9P2G3 628 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 MROH1Q8NDA8 1641 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 ERVV-2B6SEH9 535 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 SERPING1P05155 500 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 PMS1P54277 932 aaKnown RBP16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 FAM83BQ5T0W9 1011 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 SH2D4AQ9H788 454 aa16.54■□□□□ 0.24
ATP2A3-204ENST00000397035 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 KRT15P19012 456 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 MRPL12P52815 198 aaKnown RBP16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 PPP2R2AP63151 447 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 ARL6IP4Q66PJ3 421 aaKnown RBP16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 EYA3Q99504 573 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 SCP2P22307 547 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 NUGGCQ68CJ6 796 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 DNAAF5Q86Y56 855 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 MDM1Q8TC05 714 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 H0Y3Z8 333 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 MEIS1O00470 390 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 FANCGO15287 622 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 ALDH3A1P30838 453 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 PABPC4Q13310 644 aaKnown RBP eCLIP16.53■□□□□ 0.245e-7■■■□□ 18.2
ATP2A3-204ENST00000397035 SNX1Q13596 522 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 MESDQ14696 234 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 CCDC13Q8IYE1 715 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 SPDL1Q96EA4 605 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 CYFIP2Q96F07 1278 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 TAF1DQ9H5J8 278 aaPredicted RBP16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 RNF14Q9UBS8 474 aa16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 TPX2Q9ULW0 747 aaKnown RBP16.53■□□□□ 0.24
ATP2A3-204ENST00000397035 CADPS2Q86UW7 1296 aa16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 STAG2Q8N3U4 1231 aa16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 TSEN2Q8NCE0 465 aaKnown RBP16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 PHF20Q9BVI0 1012 aa16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 TMEM60Q9H2L4 133 aa16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 RAD51CO43502 376 aa16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 SKAP2O75563 359 aaPredicted RBP16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 GBP1P32455 592 aa16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 SARSP49591 514 aaKnown RBP16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 PTGISQ16647 500 aa16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 AP1ARQ63HQ0 302 aa16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 RNF10Q8N5U6 811 aaKnown RBP16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 MYCT1Q8N699 235 aa16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 PIGSQ96S52 555 aa16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 FRMD4BQ9Y2L6 1034 aa16.52■□□□□ 0.24
ATP2A3-204ENST00000397035 ACSL3O95573 720 aa16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 STXBP4Q6ZWJ1 553 aa16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 TAB3Q8N5C8 712 aaPredicted RBP16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 SLC44A5Q8NCS7 719 aa16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 MYCBPAPQ8TBZ2 947 aa16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 DDX12PQ92771 950 aa16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 PSMD1Q99460 953 aa16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 SPATS2LQ9NUQ6 558 aaKnown RBP16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 TRIP13Q15645 432 aaPredicted RBP16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 GLE1Q53GS7 698 aaKnown RBP16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 ZNF365Q70YC5 407 aa16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 ZNF219Q9P2Y4 722 aaPredicted RBP16.52■□□□□ 0.23
ATP2A3-204ENST00000397035 SUN1O94901 812 aa16.51■□□□□ 0.23
ATP2A3-204ENST00000397035 PDHBP11177 359 aa16.51■□□□□ 0.23
ATP2A3-204ENST00000397035 GSTO1P78417 241 aa16.51■□□□□ 0.23
ATP2A3-204ENST00000397035 MDM2Q00987 491 aaPredicted RBP16.51■□□□□ 0.23
ATP2A3-204ENST00000397035 TAF11Q15544 211 aa16.51■□□□□ 0.23
ATP2A3-204ENST00000397035 EXOC3O60645 756 aa16.51■□□□□ 0.23
ATP2A3-204ENST00000397035 PFKFB3Q16875 520 aaPredicted RBP16.51■□□□□ 0.23
ATP2A3-204ENST00000397035 MUM1Q2TAK8 710 aa16.51■□□□□ 0.23
ATP2A3-204ENST00000397035 USH1GQ495M9 461 aa16.51■□□□□ 0.23
ATP2A3-204ENST00000397035 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms