RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CCDC43Q96MW1 224 aaKnown RBP15.41■□□□□ 0.06
NUP98-204ENST00000397004 INPP4AQ96PE3 977 aaPredicted RBP15.41■□□□□ 0.06
NUP98-204ENST00000397004 ZBTB48P10074 688 aaPredicted RBP15.4■□□□□ 0.06
NUP98-204ENST00000397004 GUCY2FP51841 1108 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 GUCY2DQ02846 1103 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 SEMA3FQ13275 785 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 CLEC10AQ8IUN9 316 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 FAM114A1Q8IWE2 563 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 COA7Q96BR5 231 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 SPZ1Q9BXG8 430 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 MAGEF1Q9HAY2 307 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 USP17L5A8MUK1 530 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 USO1O60763 962 aaKnown RBP15.4■□□□□ 0.06
NUP98-204ENST00000397004 FNTAP49354 379 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 SEC24CP53992 1094 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 NNTQ13423 1086 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 SLC10A5Q5PT55 438 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 GALNT17Q6IS24 598 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 EMBQ6PCB8 327 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 LARP4BQ92615 738 aaKnown RBP15.4■□□□□ 0.06
NUP98-204ENST00000397004 PTPROQ16827 1216 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 C8orf74Q6P047 294 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 GUF1Q8N442 669 aaKnown RBP15.4■□□□□ 0.06
NUP98-204ENST00000397004 EP400Q96L91 3159 aa15.4■□□□□ 0.06
NUP98-204ENST00000397004 GOLGA8KD6RF30 607 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 DDB1Q16531 1140 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 IFT81Q8WYA0 676 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 CEP95Q96GE4 821 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 DEF6Q9H4E7 631 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 NPHP3-ACAD11A0A0J9YXS1 232 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 HEXIM1O94992 359 aaKnown RBP15.39■□□□□ 0.05
NUP98-204ENST00000397004 FAM83BQ5T0W9 1011 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 SV2BQ7L1I2 683 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 DZIP1Q86YF9 867 aaKnown RBP15.39■□□□□ 0.05
NUP98-204ENST00000397004 HAS1Q92839 578 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 NEUROG2Q9H2A3 272 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 TBC1D7Q9P0N9 293 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 PCDHA2Q9Y5H9 948 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 PPP1R11O60927 126 aaPredicted RBP15.39■□□□□ 0.05
NUP98-204ENST00000397004 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
NUP98-204ENST00000397004 NFIXQ14938 502 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 BCAS3Q9H6U6 928 aa15.39■□□□□ 0.05
NUP98-204ENST00000397004 FRMPD2Q68DX3 1309 aaPredicted RBP15.39■□□□□ 0.05
NUP98-204ENST00000397004 SPRED3Q2MJR0 410 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 CLEC4GQ6UXB4 293 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 KRT25Q7Z3Z0 450 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 RAD54LQ92698 747 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 KRT12Q99456 494 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 GRID2IPA4D2P6 1211 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 MYBP10242 640 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 VPS72Q15906 364 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 NAV1Q8NEY1 1877 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 MYO1FO00160 1098 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 RAD51CO43502 376 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 GUCY2CP25092 1073 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 CDK8P49336 464 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 NAB2Q15742 525 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 MEI1Q5TIA1 1274 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 ALS2CLQ60I27 953 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 OR2W6PQ8NHA6 318 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 TBC1D5Q92609 795 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 RTFDC1Q9BY42 306 aaPredicted RBP15.38■□□□□ 0.05
NUP98-204ENST00000397004 TMEM59LQ9UK28 342 aa15.38■□□□□ 0.05
NUP98-204ENST00000397004 TNRC6CQ9HCJ0 1690 aaKnown RBP15.38■□□□□ 0.05
NUP98-204ENST00000397004 EBAG9O00559 213 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 HNRNPH1P31943 449 aaKnown RBP15.37■□□□□ 0.05
NUP98-204ENST00000397004 LSP1P33241 339 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 FLT3P36888 993 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 GNAQP50148 359 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 ARID5AQ03989 594 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 UAP1Q16222 522 aaPredicted RBP15.37■□□□□ 0.05
NUP98-204ENST00000397004 TMEM119Q4V9L6 283 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 IQCEQ6IPM2 695 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 DDX42Q86XP3 938 aaKnown RBP eCLIP15.37■□□□□ 0.05
NUP98-204ENST00000397004 PVALEFA0A1B0GWK0 134 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 SSU72P8A0A1W2PR75 194 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 SLURP2P0DP57 97 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 FXR2P51116 673 aaKnown RBP eCLIP15.37■□□□□ 0.057e-14■■□□□ 12.5
NUP98-204ENST00000397004 POLR2FP61218 127 aaKnown RBP15.37■□□□□ 0.05
NUP98-204ENST00000397004 ENOX2Q16206 610 aaKnown RBP15.37■□□□□ 0.05
NUP98-204ENST00000397004 ADAMTS1Q9UHI8 967 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 PCDHGC5Q9Y5F6 944 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 ERLIN2O94905 339 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 ACTN1P12814 892 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 ERVK-9P63128 1117 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 CALCRLQ16602 461 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 CCDC181Q5TID7 509 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 NOX5Q96PH1 765 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 NHSQ6T4R5 1651 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 H0YGN5 161 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 ZEB2O60315 1214 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 ZNF444Q8N0Y2 327 aaPredicted RBP15.37■□□□□ 0.05
NUP98-204ENST00000397004 AJAP1Q9UKB5 411 aaPredicted RBP15.37■□□□□ 0.05
NUP98-204ENST00000397004 NFS1Q9Y697 457 aa15.37■□□□□ 0.05
NUP98-204ENST00000397004 GTF2A1P52655 376 aaPredicted RBP15.36■□□□□ 0.05
NUP98-204ENST00000397004 COASYQ13057 564 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 UBE2SQ16763 222 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 CCDC84Q86UT8 332 aaPredicted RBP15.36■□□□□ 0.05
NUP98-204ENST00000397004 REXO1Q8N1G1 1221 aaKnown RBP15.36■□□□□ 0.05
NUP98-204ENST00000397004 RUBCNQ92622 972 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms