RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 SPATA31C2B4DYI2 1134 aa12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 MAFGO15525 162 aa12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 FOSP01100 380 aaPredicted RBP12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 METAP2P50579 478 aaKnown RBP eCLIP12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 FXR2P51116 673 aaKnown RBP eCLIP12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 MRPS9P82933 396 aaKnown RBP12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 CELF3Q5SZQ8 465 aaKnown RBP12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 MCTP2Q6DN12 878 aa12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 USP17L6PQ6QN14 398 aa12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 DHX37Q8IY37 1157 aaKnown RBP12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 GIMAP8Q8ND71 665 aaPredicted RBP12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 AFG1LQ8WV93 481 aa12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 COPS5Q92905 334 aa12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 ZNF274Q96GC6 653 aaPredicted RBP12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 CDHR1Q96JP9 859 aa12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 SENP7Q9BQF6 1050 aa12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 ALDH8A1Q9H2A2 487 aaPredicted RBP12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 BARHL2Q9NY43 387 aa12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 EYSQ5T1H1 3165 aa12.75□□□□□ -0.37
NDUFA9-202ENST00000396655 SPDYE3A6NKU9 549 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 FIBPO43427 364 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 MMP3P08254 477 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 MYL3P08590 195 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 PTGS1P23219 599 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 ITGB8P26012 769 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 CDC27P30260 824 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 ADD1P35611 737 aaKnown RBP12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 FPGSQ05932 587 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 APOBRQ0VD83 1088 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 NEDD9Q14511 834 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 HEATR3Q7Z4Q2 680 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 SESTD1Q86VW0 696 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 TMEM199Q8N511 208 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 IL31RAQ8NI17 732 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 IL17RAQ96F46 866 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 EHMT1Q9H9B1 1298 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 RIC8AQ9NPQ8 531 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 MYH7BA7E2Y1 1941 aa12.74□□□□□ -0.37
NDUFA9-202ENST00000396655 ESYT2A0FGR8 921 aa12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 PRPF3O43395 683 aaKnown RBP12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 CPA1P15085 419 aa12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 IFNAR1P17181 557 aa12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 PDIA3P30101 505 aaKnown RBP12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 PPIGQ13427 754 aaKnown RBP eCLIP12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 PFKFB3Q16875 520 aaPredicted RBP12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 NBPF20Q3BBV1 942 aa12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 WWC2Q6AWC2 1192 aa12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 NLRX1Q86UT6 975 aa12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 RAB11FIP4Q86YS3 637 aa12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 FAM177A1Q8N128 213 aaPredicted RBP12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 CCDC12Q8WUD4 166 aaPredicted RBP12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 GPRASP2Q96D09 838 aa12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 KATNAL1Q9BW62 490 aa12.73□□□□□ -0.37
NDUFA9-202ENST00000396655 hCG_1642624A0A1W2PR95 340 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 STXBP3O00186 592 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 B4GALT4O60513 344 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 GGPS1O95749 300 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 F2P00734 622 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 SCG2P13521 617 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 UBA1P22314 1058 aaKnown RBP12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 NAPAP54920 295 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 PSMC6P62333 389 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 SP2Q02086 613 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 AP3B2Q13367 1082 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 NTRK3Q16288 839 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 METTL7BQ6UX53 244 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 COL25A1Q9BXS0 654 aaPredicted RBP12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 RNF26Q9BY78 433 aaPredicted RBP12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 TRPV6Q9H1D0 765 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 HIPK3Q9H422 1215 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 MLXIPQ9HAP2 919 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 PCDHA6Q9UN73 950 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 PCDHA8Q9Y5H6 950 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 TTC28Q96AY4 2481 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 PRUNE2Q8WUY3 3088 aa12.72□□□□□ -0.37
NDUFA9-202ENST00000396655 SMCO2A6NFE2 343 aa12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 HAS3O00219 553 aa12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 CLK2P49760 499 aaKnown RBP12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 ADCY7P51828 1080 aa12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 AKAP17AQ02040 695 aaKnown RBP12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 TOB2Q14106 344 aaPredicted RBP12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 SHHQ15465 462 aa12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 HSDL1Q3SXM5 330 aa12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 FAM109BQ6ICB4 259 aaPredicted RBP12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 TYW1BQ6NUM6 668 aa12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 Q7L0L9 218 aa12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 IFNLR1Q8IU57 520 aaPredicted RBP12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 KAT2BQ92831 832 aa12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 GPKOWQ92917 476 aaPredicted RBP eCLIP12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 SPATA33Q96N06 139 aa12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 NOC4LQ9BVI4 516 aaKnown RBP12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 ZMYND12Q9H0C1 365 aa12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 NAP1L2Q9ULW6 460 aaPredicted RBP12.71□□□□□ -0.37
NDUFA9-202ENST00000396655 GNA11P29992 359 aa12.7□□□□□ -0.38
NDUFA9-202ENST00000396655 ANKRD1Q15327 319 aa12.7□□□□□ -0.38
NDUFA9-202ENST00000396655 PKN1Q16512 942 aa12.7□□□□□ -0.38
NDUFA9-202ENST00000396655 CPLX2Q6PUV4 134 aaKnown RBP12.7□□□□□ -0.38
NDUFA9-202ENST00000396655 RPUSD2Q8IZ73 545 aaKnown RBP12.7□□□□□ -0.38
NDUFA9-202ENST00000396655 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
NDUFA9-202ENST00000396655 BICD2Q8TD16 824 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms