RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 LDHAP00338 332 aaKnown RBP9.21□□□□□ -0.93
NDE1-202ENST00000396355 IL15P40933 162 aaPredicted RBP9.21□□□□□ -0.93
NDE1-202ENST00000396355 PRCCQ92733 491 aaPredicted RBP9.21□□□□□ -0.93
NDE1-202ENST00000396355 MRPL44Q9H9J2 332 aaKnown RBP9.21□□□□□ -0.93
NDE1-202ENST00000396355 CNNM1Q9NRU3 951 aa9.21□□□□□ -0.93
NDE1-202ENST00000396355 ZBTB1Q9Y2K1 713 aa9.21□□□□□ -0.93
NDE1-202ENST00000396355 C15orf41Q9Y2V0 281 aa9.21□□□□□ -0.93
NDE1-202ENST00000396355 NEDD4P46934 1319 aa9.21□□□□□ -0.93
NDE1-202ENST00000396355 ECM29Q5VYK3 1845 aa9.21□□□□□ -0.93
NDE1-202ENST00000396355 CEP350Q5VT06 3117 aa9.21□□□□□ -0.93
NDE1-202ENST00000396355 CARMIL3Q8ND23 1372 aa9.21□□□□□ -0.93
NDE1-202ENST00000396355 IQCA1LA6NCM1 817 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 B4DLN1 442 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 DKC1O60832 514 aaKnown RBP eCLIP9.21□□□□□ -0.94
NDE1-202ENST00000396355 IFIT1P09914 478 aaKnown RBP9.21□□□□□ -0.94
NDE1-202ENST00000396355 MRPL12P52815 198 aaKnown RBP9.21□□□□□ -0.94
NDE1-202ENST00000396355 NLRP12P59046 1061 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 NFIXQ14938 502 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 IFT20Q8IY31 132 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 ERLEC1Q96DZ1 483 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 BRD8Q9H0E9 1235 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 ANKZF1Q9H8Y5 726 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 MLXIPLQ9NP71 852 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 GPR108Q9NPR9 543 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 CEP126Q9P2H0 1117 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 RIC1Q4ADV7 1423 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 STAMBPO95630 424 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 ETS2P15036 469 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 ZFXP17010 805 aaPredicted RBP9.21□□□□□ -0.94
NDE1-202ENST00000396355 CASP14P31944 242 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 CLCN2P51788 898 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 HAND2P61296 217 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 UBXN1Q04323 297 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 SARM1Q6SZW1 724 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.21□□□□□ -0.94
NDE1-202ENST00000396355 RBM41Q96IZ5 413 aaKnown RBP9.21□□□□□ -0.94
NDE1-202ENST00000396355 CYTH2Q99418 400 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 DRC3Q9H069 523 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 OSBPL5Q9H0X9 879 aaPredicted RBP9.21□□□□□ -0.94
NDE1-202ENST00000396355 EPN3Q9H201 632 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 IVNS1ABPQ9Y6Y0 642 aa9.21□□□□□ -0.94
NDE1-202ENST00000396355 RNF8O76064 485 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 ATP6V1G2O95670 118 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 S100BP04271 92 aaPredicted RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 SCTRP47872 440 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 ICA1Q05084 483 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 SLMAPQ14BN4 828 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 CWF19L1Q69YN2 538 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 MIER3Q7Z3K6 550 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 ENGASEQ8NFI3 743 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 CYFIP2Q96F07 1278 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 LLPHQ9BRT6 129 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 LRRC27Q9C0I9 530 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 PALMDQ9NP74 551 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 GOLGB1Q14789 3259 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 GSTTP1A0A1W2PQM5 241 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 HNRNPRO43390 633 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 NDUFB5O43674 189 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 IDH1O75874 414 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 EIF6P56537 245 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 PPARAQ07869 468 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 RBM26Q5T8P6 1007 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 STAMQ92783 540 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 MCUR1Q96AQ8 359 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 RRP36Q96EU6 259 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 CCDC42Q96M95 316 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 MOV10L1Q9BXT6 1211 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 TEX13AQ9BXU3 409 aaPredicted RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 PUS7LQ9H0K6 701 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 CARD9Q9H257 536 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 ZNF180Q9UJW8 692 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 RCOR1Q9UKL0 485 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 PPP1R9AQ9ULJ8 1098 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 ERICH2A1L162 156 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 GLTPD2A6NH11 291 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 RNF113AO15541 343 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 AHCYL1O43865 530 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 DDNO94850 711 aaPredicted RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 MAGEA10P43363 369 aaPredicted RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 CCDC93Q567U6 631 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 TTC39AQ5SRH9 613 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 ATL3Q6DD88 541 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 VPS37DQ86XT2 251 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 DHX40Q8IX18 779 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 DTX3LQ8TDB6 740 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 RPGRQ92834 1020 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 MRRFQ96E11 262 aaKnown RBP9.2□□□□□ -0.94
NDE1-202ENST00000396355 SMC6Q96SB8 1091 aa9.2□□□□□ -0.94
NDE1-202ENST00000396355 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.2□□□□□ -0.941e-6■■■■■ 82.1
NDE1-202ENST00000396355 MAP2K7O14733 419 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 SKIP12755 728 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 KCNA3P22001 575 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 ATICP31939 592 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 CYLC1P35663 651 aaPredicted RBP9.19□□□□□ -0.94
NDE1-202ENST00000396355 GRIK3Q13003 919 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 PPP1R15BQ5SWA1 713 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 TPTE2Q6XPS3 522 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 DZIP3Q86Y13 1208 aaKnown RBP9.19□□□□□ -0.94
NDE1-202ENST00000396355 CNGA4Q8IV77 575 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 VPS52Q8N1B4 723 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms