RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 RDM1Q8NG50 284 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 CUL5Q93034 780 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 KIFC2Q96AC6 838 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 CCDC51Q96ER9 411 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 FTOQ9C0B1 505 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS41-203ENST00000395969 PLEKHA4Q9H4M7 779 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 GOPCQ9HD26 462 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 MED4Q9NPJ6 270 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 VPS54Q9P1Q0 977 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 RAB21Q9UL25 225 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 THSD7BQ9C0I4 1608 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 USP17L5A8MUK1 530 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 PSMD14O00487 310 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 PMM2O15305 246 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 CBFA2T2O43439 604 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 SNRPFP62306 86 aaKnown RBP5.98□□□□□ -1.45
VPS41-203ENST00000395969 PPP2R3AQ06190 1150 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 NFIAQ12857 509 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 PTGDRQ13258 359 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 MYBPC2Q14324 1141 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 NR1I3Q14994 352 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 AOC3Q16853 763 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 SPATA1Q5VX52 437 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 TMEM139Q8IV31 216 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 PARP9Q8IXQ6 854 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 MED15Q96RN5 788 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 ZKSCAN3Q9BRR0 538 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 TIPINQ9BVW5 301 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 EDEM3Q9BZQ6 932 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 THAP9Q9H5L6 903 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 VCPKMTQ9H867 229 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 KLHL42Q9P2K6 505 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 WNT7AO00755 349 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 TNNI2P48788 182 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 NLRP5P59047 1200 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 SF3B2Q13435 895 aaKnown RBP5.98□□□□□ -1.45
VPS41-203ENST00000395969 ABCB5Q2M3G0 1257 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 NIM1KQ8IY84 436 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 REM2Q8IYK8 340 aaPredicted RBP5.98□□□□□ -1.45
VPS41-203ENST00000395969 REXO1Q8N1G1 1221 aaKnown RBP5.98□□□□□ -1.45
VPS41-203ENST00000395969 GOLGA1Q92805 767 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 PRMT6Q96LA8 375 aaPredicted RBP5.98□□□□□ -1.45
VPS41-203ENST00000395969 CTAGE1Q96RT6 745 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 TAOK3Q9H2K8 898 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 CABP5Q9NP86 173 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 IFNKQ9P0W0 207 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 VPS18Q9P253 973 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 SEC63Q9UGP8 760 aaKnown RBP5.98□□□□□ -1.45
VPS41-203ENST00000395969 ZBTB21Q9ULJ3 1066 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 KCNJ14Q9UNX9 436 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 SLC45A1Q9Y2W3 748 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 PCDHA2Q9Y5H9 948 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 TRPM7Q96QT4 1865 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 IGLV3-22A0A075B6J6 115 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 A0A1W2PQJ5 194 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 UBE2Q2LH0YL09 131 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 PPIP5K2O43314 1243 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 EEF2P13639 858 aaKnown RBP5.97□□□□□ -1.45
VPS41-203ENST00000395969 CHRNA5P30532 468 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 HNRNPH3P31942 346 aaKnown RBP5.97□□□□□ -1.45
VPS41-203ENST00000395969 SETQ01105 290 aaPredicted RBP5.97□□□□□ -1.45
VPS41-203ENST00000395969 TRIM14Q14142 442 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 RRP1BQ14684 758 aaKnown RBP5.97□□□□□ -1.45
VPS41-203ENST00000395969 TADA2BQ86TJ2 420 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 ADSSL1Q8N142 457 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 GPC2Q8N158 579 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 SLC44A5Q8NCS7 719 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 SYMPKQ92797 1274 aaKnown RBP5.97□□□□□ -1.45
VPS41-203ENST00000395969 SLC5A5Q92911 643 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 STRA6Q9BX79 667 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 NAA15Q9BXJ9 866 aaKnown RBP5.97□□□□□ -1.45
VPS41-203ENST00000395969 ST6GALNAC4Q9H4F1 302 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 ARHGEF10LQ9HCE6 1279 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 PDE11AQ9HCR9 933 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 L1RE1Q9UN81 338 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 A0A087WUV0 522 aaPredicted RBP5.97□□□□□ -1.45
VPS41-203ENST00000395969 A0A087WWV3 80 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 C19orf81C9J6K1 198 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 ZSCAN12O43309 604 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 ASNSP08243 561 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 POLD1P28340 1107 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 CXCL9Q07325 125 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 SPAG1Q07617 926 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 ZCWPW2Q504Y3 356 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 SYDE2Q5VT97 1194 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 CIAPIN1Q6FI81 312 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 OTUD7BQ6GQQ9 843 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 HDXQ7Z353 690 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 VSTM4Q8IW00 320 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 ZFPM1Q8IX07 1006 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 MSANTD4Q8NCY6 345 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 HAS1Q92839 578 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 GPR101Q96P66 508 aaPredicted RBP5.97□□□□□ -1.45
VPS41-203ENST00000395969 PANX2Q96RD6 677 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 AMNQ9BXJ7 453 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 TANGO6Q9C0B7 1094 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 NT5C3AQ9H0P0 336 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 ANKZF1Q9H8Y5 726 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 TUFT1Q9NNX1 390 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 MYOZ2Q9NPC6 264 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms