RNA–Protein interactions for RNA: ENST00000395002.6

FAM13A-202, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM13A, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-202ENST00000395002 VPS16Q9H269 839 aa9.42□□□□□ -0.9
FAM13A-202ENST00000395002 PARVGQ9HBI0 331 aa9.42□□□□□ -0.9
FAM13A-202ENST00000395002 LRRC4Q9HBW1 653 aa9.42□□□□□ -0.9
FAM13A-202ENST00000395002 SUPT20HL2P0C7V6 817 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 CKAP4Q07065 602 aaKnown RBP9.41□□□□□ -0.9
FAM13A-202ENST00000395002 NUDT18Q6ZVK8 323 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 UPF1Q92900 1129 aaKnown RBP eCLIP9.41□□□□□ -0.9
FAM13A-202ENST00000395002 SCAF8Q9UPN6 1271 aaKnown RBP9.41□□□□□ -0.9
FAM13A-202ENST00000395002 TRAPPC3O43617 180 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 GGPS1O95749 300 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 LDHAP00338 332 aaKnown RBP9.41□□□□□ -0.9
FAM13A-202ENST00000395002 STAT1P42224 750 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 ARHGAP4P98171 946 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 TSPY1Q01534 308 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 LRMPQ12912 555 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 PPFIA1Q13136 1202 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 PI4K2BQ8TCG2 481 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 ZC3H15Q8WU90 426 aaKnown RBP9.41□□□□□ -0.9
FAM13A-202ENST00000395002 PGBD4Q96DM1 585 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 SMARCAD1Q9H4L7 1026 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 AAASQ9NRG9 546 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 MTMR4Q9NYA4 1195 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 CPA4Q9UI42 421 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 CCDC85CA6NKD9 419 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 GNG11P61952 73 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 PPP2R3AQ06190 1150 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 GOLGA8FQ08AF8 430 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 GOLGA8DPQ0D2H9 430 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 VEPH1Q14D04 833 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 TRIM50Q86XT4 487 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 REM2Q8IYK8 340 aaPredicted RBP9.41□□□□□ -0.9
FAM13A-202ENST00000395002 PPM1KQ8N3J5 372 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 RNF139Q8WU17 664 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 FAM149B1Q96BN6 582 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 BLZF1Q9H2G9 400 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 CTTNBP2NLQ9P2B4 639 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 TTLL3Q9Y4R7 772 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 TMEM88BA6NKF7 163 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 SLU7O95391 586 aaKnown RBP9.41□□□□□ -0.9
FAM13A-202ENST00000395002 XRCC6P12956 609 aaKnown RBP eCLIP9.41□□□□□ -0.9
FAM13A-202ENST00000395002 RCAN1P53805 252 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 FKBP1BP68106 108 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 DDR1Q08345 913 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 SBK1Q52WX2 424 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 FAM173BQ6P4H8 233 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 GBP6Q6ZN66 633 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 NELFBQ8WX92 580 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 IQCDQ96DY2 449 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 NT5C1BQ96P26 610 aa9.41□□□□□ -0.9
FAM13A-202ENST00000395002 MEGF6O75095 1541 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 GTPBP6O43824 516 aaPredicted RBP9.4□□□□□ -0.9
FAM13A-202ENST00000395002 CAP2P40123 477 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 STAT5BP51692 787 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 OSTNP61366 133 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 ADAM9Q13443 819 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 BFSP2Q13515 415 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 RGMBQ6NW40 437 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 USP17L6PQ6QN14 398 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 YAF2Q8IY57 180 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 SEPT1Q8WYJ6 367 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 HTATIP2Q9BUP3 242 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 LMCD1Q9NZU5 365 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 GSG1L2A8MUP6 293 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 CCDC175P0C221 793 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 HOXA10P31260 410 aaPredicted RBP9.4□□□□□ -0.9
FAM13A-202ENST00000395002 PRELPP51888 382 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 GRM4Q14833 912 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 NBPF9Q3BBW0 867 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 NBPF12Q5TAG4 269 aaPredicted RBP9.4□□□□□ -0.9
FAM13A-202ENST00000395002 GANCQ8TET4 914 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 RNF208Q9H0X6 261 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 IFT122Q9HBG6 1241 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 SLC9A2Q9UBY0 812 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 SERTAD1Q9UHV2 236 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 CPSF3Q9UKF6 684 aaKnown RBP9.4□□□□□ -0.9
FAM13A-202ENST00000395002 CEMIPQ8WUJ3 1361 aa9.4□□□□□ -0.9
FAM13A-202ENST00000395002 MAGEB2O15479 319 aa9.4□□□□□ -0.91
FAM13A-202ENST00000395002 NFKBIAP25963 317 aa9.4□□□□□ -0.91
FAM13A-202ENST00000395002 ERCC5P28715 1186 aaPredicted RBP9.4□□□□□ -0.91
FAM13A-202ENST00000395002 QARSP47897 775 aaKnown RBP9.4□□□□□ -0.91
FAM13A-202ENST00000395002 BACE1P56817 501 aa9.4□□□□□ -0.91
FAM13A-202ENST00000395002 SWSAP1Q6NVH7 229 aa9.4□□□□□ -0.91
FAM13A-202ENST00000395002 ATG9AQ7Z3C6 839 aa9.4□□□□□ -0.91
FAM13A-202ENST00000395002 CDCA5Q96FF9 252 aa9.4□□□□□ -0.91
FAM13A-202ENST00000395002 ZNF512BQ96KM6 892 aaPredicted RBP9.4□□□□□ -0.91
FAM13A-202ENST00000395002 NAP1L3Q99457 506 aaPredicted RBP9.4□□□□□ -0.91
FAM13A-202ENST00000395002 TRMT1Q9NXH9 659 aaKnown RBP9.4□□□□□ -0.91
FAM13A-202ENST00000395002 PCDHA10Q9Y5I2 948 aa9.4□□□□□ -0.91
FAM13A-202ENST00000395002 REREQ9P2R6 1566 aa9.4□□□□□ -0.91
FAM13A-202ENST00000395002 DISP2A7MBM2 1401 aa9.4□□□□□ -0.91
FAM13A-202ENST00000395002 P4HBP07237 508 aaKnown RBP9.39□□□□□ -0.91
FAM13A-202ENST00000395002 PTK2Q05397 1052 aa9.39□□□□□ -0.91
FAM13A-202ENST00000395002 CEP57Q86XR8 500 aa9.39□□□□□ -0.91
FAM13A-202ENST00000395002 THNSL1Q8IYQ7 743 aa9.39□□□□□ -0.91
FAM13A-202ENST00000395002 MSTO1Q9BUK6 570 aa9.39□□□□□ -0.91
FAM13A-202ENST00000395002 HMX1Q9NP08 348 aaPredicted RBP9.39□□□□□ -0.91
FAM13A-202ENST00000395002 GPRC5DQ9NZD1 345 aa9.39□□□□□ -0.91
FAM13A-202ENST00000395002 GABBR1Q9UBS5 961 aa9.39□□□□□ -0.91
FAM13A-202ENST00000395002 GLTPD2A6NH11 291 aa9.39□□□□□ -0.91
FAM13A-202ENST00000395002 IPO5O00410 1097 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms