RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ZNF513Q8N8E2 541 aaPredicted RBP6.25□□□□□ -1.41
RFFL-202ENST00000394597 FAM163AQ96GL9 167 aaPredicted RBP6.25□□□□□ -1.41
RFFL-202ENST00000394597 PGBD1Q96JS3 809 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 PSMD1Q99460 953 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 TSC22D3Q99576 134 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 NBPF3Q9H094 633 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 NSRP1Q9H0G5 558 aaKnown RBP6.25□□□□□ -1.41
RFFL-202ENST00000394597 ZNF408Q9H9D4 720 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 F5H6K3 240 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 ZBTB5O15062 677 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 N4BP1O75113 896 aaKnown RBP6.25□□□□□ -1.41
RFFL-202ENST00000394597 KLRC3Q07444 240 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 CRYMQ14894 314 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 CDC37Q16543 378 aaPredicted RBP6.25□□□□□ -1.41
RFFL-202ENST00000394597 PRR16Q569H4 304 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 FAM43BQ6ZT52 329 aaPredicted RBP6.25□□□□□ -1.41
RFFL-202ENST00000394597 STAG2Q8N3U4 1231 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 TRIML1Q8N9V2 468 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 AGBL3Q8NEM8 1001 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 AK8Q96MA6 479 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 ZDHHC15Q96MV8 337 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 CPVLQ9H3G5 476 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 PKD2L1Q9P0L9 805 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 ZNF70Q9UC06 446 aaPredicted RBP6.25□□□□□ -1.41
RFFL-202ENST00000394597 CCPG1Q9ULG6 757 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 COL18A1P39060 1754 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 LTBP4Q8N2S1 1624 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 H3BQF6 201 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 MYO1FO00160 1098 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 CHMP2AO43633 222 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 TACC1O75410 805 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 PTPREP23469 700 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 CETN1Q12798 172 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 KIF5AQ12840 1032 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 PDCLQ13371 301 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 DPCR1Q3MIW9 517 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 GNPTABQ3T906 1256 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 TCERG1LQ5VWI1 586 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 ARL6IP4Q66PJ3 421 aaKnown RBP6.25□□□□□ -1.41
RFFL-202ENST00000394597 HIBCHQ6NVY1 386 aaPredicted RBP6.25□□□□□ -1.41
RFFL-202ENST00000394597 SLC35F6Q8N357 371 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 MIPOL1Q8TD10 442 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 OXER1Q8TDS5 423 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 FAM151AQ8WW52 585 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 AKT1S1Q96B36 256 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 BLZF1Q9H2G9 400 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 VCXQ9H320 206 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 BARHL2Q9NY43 387 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 NFE2L3Q9Y4A8 694 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 GTPBP6O43824 516 aaPredicted RBP6.24□□□□□ -1.41
RFFL-202ENST00000394597 LUC7L3O95232 432 aaKnown RBP6.24□□□□□ -1.41
RFFL-202ENST00000394597 KRT83P78385 493 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 CCDC38Q502W7 563 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 ZBTB10Q96DT7 871 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 UIMC1Q96RL1 719 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 SLF1Q9BQI6 1058 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 SPZ1Q9BXG8 430 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 ACTR5Q9H9F9 607 aaPredicted RBP6.24□□□□□ -1.41
RFFL-202ENST00000394597 CNOT7Q9UIV1 285 aaKnown RBP6.24□□□□□ -1.41
RFFL-202ENST00000394597 ZBTB21Q9ULJ3 1066 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 SAR1BQ9Y6B6 198 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 KDM3AQ9Y4C1 1321 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 KIF28PB7ZC32 967 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 TROAPQ12815 778 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 MYO1EQ12965 1108 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 C8orf74Q6P047 294 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 ZNF579Q8NAF0 562 aaKnown RBP6.24□□□□□ -1.41
RFFL-202ENST00000394597 LRRN4CLQ8ND94 238 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 RPGRIP1Q96KN7 1286 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 SELENOSQ9BQE4 189 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 NYAP2Q9P242 653 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 CTNND2Q9UQB3 1225 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 PKD1L3Q7Z443 1732 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 DKC1O60832 514 aaKnown RBP eCLIP6.24□□□□□ -1.41
RFFL-202ENST00000394597 GAS7O60861 476 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 ZRANB2O95218 330 aaKnown RBP eCLIP6.24□□□□□ -1.41
RFFL-202ENST00000394597 PAK1Q13153 545 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 GKAP1Q5VSY0 366 aaPredicted RBP6.24□□□□□ -1.41
RFFL-202ENST00000394597 DYMQ7RTS9 669 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 APOBEC3FQ8IUX4 373 aaKnown RBP6.24□□□□□ -1.41
RFFL-202ENST00000394597 ADGRF4Q8IZF3 695 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 CCDC63Q8NA47 563 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 MIEF2Q96C03 454 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 IFT74Q96LB3 600 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 SPAG5Q96R06 1193 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 ZNF341Q9BYN7 854 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 VPS33BQ9H267 617 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 CUEDC2Q9H467 287 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 KIF9Q9HAQ2 790 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 FANCLQ9NW38 375 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 MAPK8IP1Q9UQF2 711 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 STK38LQ9Y2H1 464 aa6.24□□□□□ -1.41
RFFL-202ENST00000394597 USP17L10C9JJH3 530 aa6.23□□□□□ -1.41
RFFL-202ENST00000394597 BACH1O14867 736 aa6.23□□□□□ -1.41
RFFL-202ENST00000394597 MEFVO15553 781 aaPredicted RBP6.23□□□□□ -1.41
RFFL-202ENST00000394597 AKR1B10O60218 316 aa6.23□□□□□ -1.41
RFFL-202ENST00000394597 CAND2O75155 1236 aa6.23□□□□□ -1.41
RFFL-202ENST00000394597 SASH3O75995 380 aa6.23□□□□□ -1.41
RFFL-202ENST00000394597 VIMP08670 466 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms