RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 ANAPC4Q9UJX5 808 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 EIF3CLB5ME19 914 aaKnown RBP15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 KRIT1O00522 736 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 COPB2P35606 906 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 TOB2Q14106 344 aaPredicted RBP15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 DPCR1Q3MIW9 517 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 DENND2CQ68D51 928 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 EIF3CQ99613 913 aaKnown RBP15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 PCDHB6Q9Y5E3 794 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 EFCAB8A8MWE9 144 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 GIPC1O14908 333 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 LARGE1O95461 756 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 VIMP08670 466 aaKnown RBP15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 DNAJC21Q5F1R6 531 aaKnown RBP15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 USP17L5A8MUK1 530 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 PLCG1P19174 1290 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 SLFN12LQ6IEE8 588 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 ZNF34Q8IZ26 560 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 TSC1Q92574 1164 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 ATP2A3Q93084 1043 aa15.75■□□□□ 0.11
PPARGC1B-203ENST00000394320 INO80B-WBP1J3KQ70 363 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 PHBP35232 272 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 RNF207Q6ZRF8 634 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 SEPT14Q6ZU15 432 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 CCDC170Q8IYT3 715 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 NEDD1Q8NHV4 660 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 INO80BQ9C086 356 aaPredicted RBP15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 SPATA31A1Q5TZJ5 1347 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 FAM84BQ96KN1 310 aaPredicted RBP15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 TBC1D22BQ9NU19 505 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 MYO3AQ8NEV4 1616 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 DIP2AQ14689 1571 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 PLEKHA8P1O95397 391 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 ZBED6P86452 979 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 RNF14Q9UBS8 474 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 AKT3Q9Y243 479 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 MYO1FO00160 1098 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 HHATQ5VTY9 493 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 PAGE5Q96GU1 130 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 PSMB7Q99436 277 aa15.74■□□□□ 0.11
PPARGC1B-203ENST00000394320 REREQ9P2R6 1566 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 UBXN2AP68543 259 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 IGBP1P78318 339 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 RNF169Q8NCN4 708 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 TCP11Q8WWU5 503 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 DDX41Q9UJV9 622 aaKnown RBP15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 U2AF2P26368 475 aaKnown RBP eCLIP15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 CASP14P31944 242 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 RESP18Q5W5W9 173 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 PDXDC2PQ6P474 469 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 MIGA2Q7L4E1 593 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 SYNE4Q8N205 404 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 ENAHQ8N8S7 591 aaPredicted RBP15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 PROCA1Q8NCQ7 364 aaPredicted RBP15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 MCPH1Q8NEM0 835 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 PIK3C2BO00750 1634 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 HPDP32754 393 aaPredicted RBP15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 APBA1Q02410 837 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 DESI2Q9BSY9 194 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 NUB1Q9Y5A7 615 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 NEDD4P46934 1319 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 PPFIA4O75335 1185 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 HSPA6P17066 643 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 LY9Q9HBG7 655 aa15.73■□□□□ 0.11
PPARGC1B-203ENST00000394320 GSG1L2A8MUP6 293 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 GMNNO75496 209 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 LDHAP00338 332 aaKnown RBP15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 UBE2SQ16763 222 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 CERKQ8TCT0 537 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 MED7O43513 233 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 CRCPO75575 148 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 CSF1RP07333 972 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 KRT76Q01546 638 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 UNC13DQ70J99 1090 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 SMC1BQ8NDV3 1235 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 PGBD1Q96JS3 809 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 NDUFAB1O14561 156 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 KRT15P19012 456 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 GPSM2P81274 684 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 KRT71Q3SY84 523 aa15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 TDRD3Q9H7E2 651 aaKnown RBP15.72■□□□□ 0.11
PPARGC1B-203ENST00000394320 PVALEFA0A1B0GWK0 134 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 MXI1P50539 228 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 MNAT1P51948 309 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 ATG9AQ7Z3C6 839 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 GPR101Q96P66 508 aaPredicted RBP15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 PCDHA6Q9UN73 950 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 PCDHB4Q9Y5E5 795 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 PCDHA8Q9Y5H6 950 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 SLC12A2P55011 1212 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 RINT1Q6NUQ1 792 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 CASC4Q6P4E1 433 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 SPATA24Q86W54 205 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 ABI1Q8IZP0 508 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 PROM2Q8N271 834 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 KIAA1586Q9HCI6 787 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 MRPL47Q9HD33 250 aaKnown RBP15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 ZNF233A6NK53 670 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 CYP2D6P10635 497 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms