RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 KANK3Q6NY19 840 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 DHX32Q7L7V1 743 aaKnown RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 AACSQ86V21 672 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 SLC15A3Q8IY34 581 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 ASAP3Q8TDY4 903 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 CASKIN2Q8WXE0 1202 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 CENPTQ96BT3 561 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 TXLNGQ9NUQ3 528 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 RASAL2Q9UJF2 1139 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 USP15Q9Y4E8 981 aaPredicted RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 ZC3H13Q5T200 1668 aaKnown RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 ZFYVE9O95405 1425 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 TJP3O95049 919 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 ASLP04424 464 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 CHN1P15882 459 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 DNA2P51530 1060 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 PDE1BQ01064 536 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 ITGA7Q13683 1181 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 PKN1Q16512 942 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 CCDC174Q6PII3 467 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 HDGFL2Q7Z4V5 671 aaPredicted RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 PIGWQ7Z7B1 504 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 WDR75Q8IWA0 830 aaKnown RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 STAG2Q8N3U4 1231 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 CXorf38Q8TB03 319 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 FBXO41Q8TF61 875 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 ATP8B4Q8TF62 1192 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 ATP6V0A1Q93050 837 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 PCMTD1Q96MG8 357 aaPredicted RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 SMC6Q96SB8 1091 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 KRT12Q99456 494 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 PUS3Q9BZE2 481 aaKnown RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 FAM114A2Q9NRY5 505 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 EHD2Q9NZN4 543 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 HTR3EA5X5Y0 456 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 ZSCAN5CA6NGD5 496 aaPredicted RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 UBTFL6P0CB48 400 aaPredicted RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 TPBGLP0DKB5 382 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 SMARCA1P28370 1054 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 IFNAR2P48551 515 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 SARSP49591 514 aaKnown RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 KCNN1Q92952 543 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 BHMTQ93088 406 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 DDX21Q9NR30 783 aaKnown RBP eCLIP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 TSC22D4Q9Y3Q8 395 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 SPHKAPQ2M3C7 1700 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 ABCC12Q96J65 1359 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 ABCA6Q8N139 1617 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 A0A0J9YVX5 310 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 GOLGA8AA7E2F4 631 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 AKR1B10O60218 316 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 CD97P48960 835 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 PLOD1Q02809 727 aaPredicted RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 FLIIQ13045 1269 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 CYLC2Q14093 348 aaPredicted RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 TTF1Q15361 905 aaPredicted RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 ZNF572Q7Z3I7 529 aaPredicted RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 FERMT2Q96AC1 680 aa9.28□□□□□ -0.92
DHFR2-202ENST00000394221 PHAXQ9H814 394 aaKnown RBP9.28□□□□□ -0.92
DHFR2-202ENST00000394221 IQGAP3Q86VI3 1631 aa9.27□□□□□ -0.92
DHFR2-202ENST00000394221 JCADQ9P266 1359 aa9.27□□□□□ -0.92
DHFR2-202ENST00000394221 MAST1Q9Y2H9 1570 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 PYGMP11217 842 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 PRLRP16471 622 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 NFKBIAP25963 317 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 COPB1P53618 953 aaKnown RBP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 HPCAP84074 193 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 DMPKQ09013 629 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 BNIP1Q12981 228 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 INTS8Q75QN2 995 aaKnown RBP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 SPATA24Q86W54 205 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 ST13P4Q8IZP2 240 aaPredicted RBP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 DEPTORQ8TB45 409 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 DYDC2Q96IM9 177 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 LACRTQ9GZZ8 138 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 CCDC113Q9H0I3 377 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 DDX25Q9UHL0 483 aaKnown RBP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 SERTAD1Q9UHV2 236 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 USP42Q9H9J4 1324 aaKnown RBP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 EIF3FO00303 357 aaPredicted RBP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 TMEM259Q4ZIN3 620 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 LRRC43Q8N309 656 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 CASP10Q92851 521 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 MPP4Q96JB8 637 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 DRC3Q9H069 523 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 TRIM33Q9UPN9 1127 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 TUBGCP6Q96RT7 1819 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 CHL1O00533 1208 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 POLR2DO15514 142 aaKnown RBP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 KRT31Q15323 416 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 SEPT7Q16181 437 aaKnown RBP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 CLPPQ16740 277 aaPredicted RBP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 VSIG1Q86XK7 387 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.27□□□□□ -0.93
DHFR2-202ENST00000394221 KLHDC4Q8TBB5 520 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 NELFBQ8WX92 580 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 MAML3Q96JK9 1138 aa9.27□□□□□ -0.93
DHFR2-202ENST00000394221 PBKQ96KB5 322 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms