RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 ZXDAP98168 799 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 CTDSPL2Q05D32 466 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 CTR9Q6PD62 1173 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 RPAINQ86UA6 219 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 FBXO16Q8IX29 292 aaPredicted RBP12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 STAG1Q8WVM7 1258 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 ACAD9Q9H845 621 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 VTA1Q9NP79 307 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 TRPC6Q9Y210 931 aa12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 TRIP12Q14669 1992 aaPredicted RBP12.83□□□□□ -0.36
VTI1BP2-201ENST00000394154 H3BNC9 293 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 LTBRP36941 435 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 CDK8P49336 464 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 VCPP55072 806 aaKnown RBP12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 EXOSC10Q01780 885 aaKnown RBP12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 SMAD4Q13485 552 aaKnown RBP12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 DUSP28Q4G0W2 176 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 EPC2Q52LR7 807 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 BRDTQ58F21 947 aaPredicted RBP12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 TBC1D10CQ8IV04 446 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 KIFC2Q96AC6 838 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 TMX3Q96JJ7 454 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 SH2B1Q9NRF2 756 aaPredicted RBP12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 TOMM22Q9NS69 142 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 HOMER2Q9NSB8 354 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 COL4A6Q14031 1691 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 WDR19Q8NEZ3 1342 aa12.82□□□□□ -0.36
VTI1BP2-201ENST00000394154 FAM186AA6NE01 2351 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 H0Y858 1186 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 KPNA6O60684 536 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 KRT37O76014 449 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 CXCL10P02778 98 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 SELPP16109 830 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 AVPR2P30518 371 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 PDE4BQ07343 736 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 GPM6BQ13491 265 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 IKBKEQ14164 716 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 GPNMBQ14956 572 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 CTC1Q2NKJ3 1217 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 TMEM63BQ5T3F8 832 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 C12orf60Q5U649 245 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 FAM117BQ6P1L5 589 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 Q6ZUG5 572 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 C16orf86Q6ZW13 317 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 LRRC8DQ7L1W4 858 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 EEPD1Q7L9B9 569 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 MB21D2Q8IYB1 491 aaPredicted RBP12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 A1CFQ9NQ94 594 aaKnown RBP12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 TLR9Q9NR96 1032 aa12.81□□□□□ -0.36
VTI1BP2-201ENST00000394154 RIF1Q5UIP0 2472 aaKnown RBP12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 CYP2D7A0A087X1C5 515 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 B4E1Z4 1266 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 F5H6K3 240 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 PRC1O43663 620 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 NDUFB10O96000 172 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 NBL1P41271 181 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 NT5C2P49902 561 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 KLRC3Q07444 240 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 SIGLEC14Q08ET2 396 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 CLUL1Q15846 466 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 PTGISQ16647 500 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 RRP12Q5JTH9 1297 aaKnown RBP12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 FBXL16Q8N461 479 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 SPRYD3Q8NCJ5 442 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 TCEANC2Q96MN5 208 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 ZNF287Q9HBT7 754 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 FEM1BQ9UK73 627 aa12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 GREB1LQ9C091 1923 aaPredicted RBP12.8□□□□□ -0.36
VTI1BP2-201ENST00000394154 ORC4O43929 436 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 FGRP09769 529 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 FDX1P10109 184 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 HTRA4P83105 476 aaPredicted RBP12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 TOB2Q14106 344 aaPredicted RBP12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 SART3Q15020 963 aaKnown RBP12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 STK11IPQ8N1F8 1099 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 OR6J1Q8NGC5 347 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 MORC4Q8TE76 937 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 ESR2Q92731 530 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 TMEM87BQ96K49 555 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 MTA3Q9BTC8 594 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 WDR11Q9BZH6 1224 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 RNF146Q9NTX7 359 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 DDX49Q9Y6V7 483 aaKnown RBP12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 NEDD4P46934 1319 aa12.79□□□□□ -0.36
VTI1BP2-201ENST00000394154 NLRC5Q86WI3 1866 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 MICAL3Q7RTP6 2002 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 NBNO60934 754 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 KDM4AO75164 1064 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 AMHP03971 560 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 DLX2Q07687 328 aaPredicted RBP12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 RBL2Q08999 1139 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 CUL4AQ13619 759 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 TCTN1Q2MV58 587 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 TKFCQ3LXA3 575 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 CHST3Q7LGC8 479 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 PPP1R13LQ8WUF5 828 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 BRF1Q92994 677 aa12.78□□□□□ -0.36
VTI1BP2-201ENST00000394154 CHMP4CQ96CF2 233 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms