RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 GLT1D1Q96MS3 346 aa21.7■■□□□ 1.06
PDLIM7-204ENST00000393546 ADAMTS3O15072 1205 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 JAK2O60674 1132 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 CABYRO75952 493 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 ZNF76P36508 570 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 ARHGAP1Q07960 439 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 ST3GAL1Q11201 340 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 LRRC26Q2I0M4 334 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 BLIDQ8IZY5 108 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 GPRASP2Q96D09 838 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 STARD7Q9NQZ5 370 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 POLR3EQ9NVU0 708 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 NR2E3Q9Y5X4 410 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 UBIAD1Q9Y5Z9 338 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 PDE4DIPQ5VU43 2346 aa21.69■■□□□ 1.06
PDLIM7-204ENST00000393546 MKI67P46013 3256 aaKnown RBP21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 A6NJR5 290 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 MAFGO15525 162 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 KPNA6O60684 536 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 GGPS1O95749 300 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 ARHGAP4P98171 946 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 SP2Q02086 613 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 NEDD9Q14511 834 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 CELF3Q5SZQ8 465 aaKnown RBP21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 DAGLBQ8NCG7 672 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 RASGRP4Q8TDF6 673 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 AFG1LQ8WV93 481 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 EMID1Q96A84 441 aaPredicted RBP21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 MXRA8Q9BRK3 442 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 PHF20Q9BVI0 1012 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 MLXIPQ9HAP2 919 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 JADE2Q9NQC1 790 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 KCNJ14Q9UNX9 436 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 ELP1O95163 1332 aa21.68■■□□□ 1.06
PDLIM7-204ENST00000393546 MYH7BA7E2Y1 1941 aa21.67■■□□□ 1.06
PDLIM7-204ENST00000393546 MYL3P08590 195 aa21.67■■□□□ 1.06
PDLIM7-204ENST00000393546 ITGB5P18084 799 aa21.67■■□□□ 1.06
PDLIM7-204ENST00000393546 UBA1P22314 1058 aaKnown RBP21.67■■□□□ 1.06
PDLIM7-204ENST00000393546 SEMA3FQ13275 785 aa21.67■■□□□ 1.06
PDLIM7-204ENST00000393546 MYSM1Q5VVJ2 828 aa21.67■■□□□ 1.06
PDLIM7-204ENST00000393546 CXCL17Q6UXB2 119 aa21.67■■□□□ 1.06
PDLIM7-204ENST00000393546 SENP7Q9BQF6 1050 aa21.67■■□□□ 1.06
PDLIM7-204ENST00000393546 CYP3A4P08684 503 aa21.66■■□□□ 1.06
PDLIM7-204ENST00000393546 RTP1P59025 263 aa21.66■■□□□ 1.06
PDLIM7-204ENST00000393546 HMGN5P82970 282 aaKnown RBP21.66■■□□□ 1.06
PDLIM7-204ENST00000393546 MTMR1Q13613 665 aa21.66■■□□□ 1.06
PDLIM7-204ENST00000393546 TRIM29Q14134 588 aa21.66■■□□□ 1.06
PDLIM7-204ENST00000393546 CEP55Q53EZ4 464 aa21.66■■□□□ 1.06
PDLIM7-204ENST00000393546 C1orf53Q5VUE5 145 aa21.66■■□□□ 1.06
PDLIM7-204ENST00000393546 GIMAP8Q8ND71 665 aaPredicted RBP21.66■■□□□ 1.06
PDLIM7-204ENST00000393546 TNRC18O15417 2968 aaPredicted RBP21.66■■□□□ 1.06
PDLIM7-204ENST00000393546 SORBS3O60504 671 aa21.65■■□□□ 1.06
PDLIM7-204ENST00000393546 CD2BP2O95400 341 aaKnown RBP21.65■■□□□ 1.06
PDLIM7-204ENST00000393546 SNX17Q15036 470 aa21.65■■□□□ 1.06
PDLIM7-204ENST00000393546 PPTC7Q8NI37 304 aa21.65■■□□□ 1.06
PDLIM7-204ENST00000393546 TMX3Q96JJ7 454 aa21.65■■□□□ 1.06
PDLIM7-204ENST00000393546 SPATA33Q96N06 139 aa21.65■■□□□ 1.06
PDLIM7-204ENST00000393546 MTG1Q9BT17 334 aaPredicted RBP21.65■■□□□ 1.06
PDLIM7-204ENST00000393546 GJB4Q9NTQ9 266 aa21.65■■□□□ 1.06
PDLIM7-204ENST00000393546 ATP11BQ9Y2G3 1177 aa21.65■■□□□ 1.06
PDLIM7-204ENST00000393546 A0A0U1RQG5 324 aaPredicted RBP21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 M0R2N6 131 aa21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 MEIS1O00470 390 aa21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 MMP3P08254 477 aa21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 PURAQ00577 322 aaKnown RBP21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 NPY5RQ15761 445 aa21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 DGKDQ16760 1214 aa21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 CYFIP1Q7L576 1253 aa21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 NIPA1Q7RTP0 329 aa21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 C7orf61Q8IZ16 206 aa21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 CYP2W1Q8TAV3 490 aa21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 CRYGNQ8WXF5 182 aa21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 BRMS1Q9HCU9 246 aa21.64■■□□□ 1.05
PDLIM7-204ENST00000393546 PPFIA4O75335 1185 aa21.63■■□□□ 1.05
PDLIM7-204ENST00000393546 USP11P51784 963 aa21.63■■□□□ 1.05
PDLIM7-204ENST00000393546 METTL7BQ6UX53 244 aa21.63■■□□□ 1.05
PDLIM7-204ENST00000393546 KRT25Q7Z3Z0 450 aa21.63■■□□□ 1.05
PDLIM7-204ENST00000393546 FAM184AQ8NB25 1140 aa21.63■■□□□ 1.05
PDLIM7-204ENST00000393546 SEZ6LQ9BYH1 1024 aa21.63■■□□□ 1.05
PDLIM7-204ENST00000393546 BCAS3Q9H6U6 928 aa21.63■■□□□ 1.05
PDLIM7-204ENST00000393546 KCNH7Q9NS40 1196 aa21.63■■□□□ 1.05
PDLIM7-204ENST00000393546 ALPK3Q96L96 1907 aa21.63■■□□□ 1.05
PDLIM7-204ENST00000393546 ARVCFO00192 962 aa21.62■■□□□ 1.05
PDLIM7-204ENST00000393546 NOP56O00567 594 aaKnown RBP21.62■■□□□ 1.05
PDLIM7-204ENST00000393546 ATP9AO75110 1047 aa21.62■■□□□ 1.05
PDLIM7-204ENST00000393546 ARP10275 920 aa21.62■■□□□ 1.05
PDLIM7-204ENST00000393546 KCNA2P16389 499 aa21.62■■□□□ 1.05
PDLIM7-204ENST00000393546 ITGA7Q13683 1181 aa21.62■■□□□ 1.05
PDLIM7-204ENST00000393546 NONOQ15233 471 aaKnown RBP eCLIP21.62■■□□□ 1.05
PDLIM7-204ENST00000393546 HSDL1Q3SXM5 330 aa21.62■■□□□ 1.05
PDLIM7-204ENST00000393546 TRIM60Q495X7 471 aa21.62■■□□□ 1.05
PDLIM7-204ENST00000393546 PLA2G4DQ86XP0 818 aa21.62■■□□□ 1.05
PDLIM7-204ENST00000393546 TBCKQ8TEA7 893 aa21.62■■□□□ 1.05
PDLIM7-204ENST00000393546 CCDC194A0A1B0GVG4 234 aa21.61■■□□□ 1.05
PDLIM7-204ENST00000393546 FAM86B1E9PN63 330 aa21.61■■□□□ 1.05
PDLIM7-204ENST00000393546 FAM86B2P0C5J1 330 aa21.61■■□□□ 1.05
PDLIM7-204ENST00000393546 CIITAP33076 1130 aa21.61■■□□□ 1.05
PDLIM7-204ENST00000393546 KRT2P35908 639 aa21.61■■□□□ 1.05
PDLIM7-204ENST00000393546 CDK7P50613 346 aa21.61■■□□□ 1.05
PDLIM7-204ENST00000393546 FOSBP53539 338 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms