RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 FECHP22830 423 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 EIF6P56537 245 aaKnown RBP16■□□□□ 0.15
SFXN3-202ENST00000393459 FNBP4Q8N3X1 1017 aaPredicted RBP16■□□□□ 0.15
SFXN3-202ENST00000393459 TRIM51Q9BSJ1 452 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 CDCA7Q9BWT1 371 aaPredicted RBP16■□□□□ 0.15
SFXN3-202ENST00000393459 LSM14BQ9BX40 385 aaKnown RBP16■□□□□ 0.15
SFXN3-202ENST00000393459 TTYH3Q9C0H2 523 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 TCP11L1Q9NUJ3 509 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 SEPT11Q9NVA2 429 aaKnown RBP16■□□□□ 0.15
SFXN3-202ENST00000393459 LEMD3Q9Y2U8 911 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 THRAP3Q9Y2W1 955 aaKnown RBP16■□□□□ 0.15
SFXN3-202ENST00000393459 A0A087X0T9 212 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 FAM228BP0C875 321 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 UBAP2Q5T6F2 1119 aaKnown RBP16■□□□□ 0.15
SFXN3-202ENST00000393459 OTUD6AQ7L8S5 288 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 IQCKQ8N0W5 287 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 PRCCQ92733 491 aaPredicted RBP16■□□□□ 0.15
SFXN3-202ENST00000393459 TAF4BQ92750 862 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 UBA5Q9GZZ9 404 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 VCPKMTQ9H867 229 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 MCM9Q9NXL9 1143 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 SAP30BPQ9UHR5 308 aaKnown RBP16■□□□□ 0.15
SFXN3-202ENST00000393459 PNMA2Q9UL42 364 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 CNTNAP5Q8WYK1 1306 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 ANO9A1A5B4 782 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 STARD3NLO95772 234 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 KLRK1P26718 216 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 EPS15P42566 896 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 MEA1Q16626 185 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 VGLL2Q8N8G2 317 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 CDK5RAP3Q96JB5 506 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 TMEM260Q9NX78 707 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 C4AP0C0L4 1744 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
SFXN3-202ENST00000393459 CTNND1O60716 968 aaKnown RBP15.99■□□□□ 0.15
SFXN3-202ENST00000393459 LGR5O75473 907 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 VIMP08670 466 aaKnown RBP15.99■□□□□ 0.15
SFXN3-202ENST00000393459 TCERG1LQ5VWI1 586 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 FUKQ8N0W3 1084 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 SPIRE2Q8WWL2 714 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 SEC16BQ96JE7 1060 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 TRIM9Q9C026 710 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 MTFR1LQ9H019 292 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 DNAJC17Q9NVM6 304 aaKnown RBP15.99■□□□□ 0.15
SFXN3-202ENST00000393459 PLCH1Q4KWH8 1693 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 NUP188Q5SRE5 1749 aa15.99■□□□□ 0.15
SFXN3-202ENST00000393459 CSF1RP07333 972 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 CCNE1P24864 410 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 ALS2CLQ60I27 953 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 MSL3Q8N5Y2 521 aaKnown RBP15.98■□□□□ 0.15
SFXN3-202ENST00000393459 ABCC12Q96J65 1359 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 MYH2Q9UKX2 1941 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 GMNCA6NCL1 334 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 TTI1O43156 1089 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 KIF4AO95239 1232 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 EZRP15311 586 aaKnown RBP15.98■□□□□ 0.15
SFXN3-202ENST00000393459 ABCB4P21439 1286 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 ARID4AP29374 1257 aaPredicted RBP15.98■□□□□ 0.15
SFXN3-202ENST00000393459 TFAP4Q01664 338 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 ZNF211Q13398 564 aaPredicted RBP15.98■□□□□ 0.15
SFXN3-202ENST00000393459 VWA3BQ502W6 1294 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 CCDC25Q86WR0 208 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 CCDC170Q8IYT3 715 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 GIMAP8Q8ND71 665 aaPredicted RBP15.98■□□□□ 0.15
SFXN3-202ENST00000393459 MICAL1Q8TDZ2 1067 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 RAPGEF5Q92565 580 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 THAP9Q9H5L6 903 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 NPHP3-ACAD11A0A0J9YXS1 232 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 ITGB3BPQ13352 177 aaPredicted RBP15.98■□□□□ 0.15
SFXN3-202ENST00000393459 CACNA2D3Q8IZS8 1091 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 TNFRSF25Q93038 417 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 HVCN1Q96D96 273 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 ELAC2Q9BQ52 826 aaKnown RBP15.98■□□□□ 0.15
SFXN3-202ENST00000393459 NUDT12Q9BQG2 462 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 FGFBP2Q9BYJ0 223 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 ARPP21Q9UBL0 812 aaPredicted RBP15.98■□□□□ 0.15
SFXN3-202ENST00000393459 PLAGL2Q9UPG8 496 aa15.98■□□□□ 0.15
SFXN3-202ENST00000393459 A0A1W2PQC6 194 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 A8MUI8 341 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 FAM107AO95990 144 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 ZKSCAN8Q15776 578 aaPredicted RBP15.97■□□□□ 0.15
SFXN3-202ENST00000393459 TRMT1LQ7Z2T5 733 aaKnown RBP15.97■□□□□ 0.15
SFXN3-202ENST00000393459 ELOA2Q8IYF1 753 aaPredicted RBP15.97■□□□□ 0.15
SFXN3-202ENST00000393459 CCDC47Q96A33 483 aaKnown RBP15.97■□□□□ 0.15
SFXN3-202ENST00000393459 MIEF2Q96C03 454 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 LRP6O75581 1613 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 GCKP35557 465 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 SCTRP47872 440 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 NAPAP54920 295 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 TRIM68Q6AZZ1 485 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 KDM7AQ6ZMT4 941 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 TSGA10Q9BZW7 698 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 RTL9Q8NET4 1388 aa15.97■□□□□ 0.15
SFXN3-202ENST00000393459 BCL9O00512 1426 aa15.96■□□□□ 0.15
SFXN3-202ENST00000393459 FSBPO95073 299 aa15.96■□□□□ 0.15
SFXN3-202ENST00000393459 PRDX5P30044 214 aa15.96■□□□□ 0.15
SFXN3-202ENST00000393459 GIGYF2Q6Y7W6 1299 aaKnown RBP15.96■□□□□ 0.15
SFXN3-202ENST00000393459 DAAM2Q86T65 1068 aa15.96■□□□□ 0.15
SFXN3-202ENST00000393459 ADAM33Q9BZ11 813 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms