RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SSBP05455 408 aaKnown RBP eCLIP9.68□□□□□ -0.86
TDP1-203ENST00000393454 ARP10275 920 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 SETQ01105 290 aaPredicted RBP9.68□□□□□ -0.86
TDP1-203ENST00000393454 GHRHRQ02643 423 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 TMEM119Q4V9L6 283 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 HAUS3Q68CZ6 603 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 SPC24Q8NBT2 197 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 IL31RAQ8NI17 732 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
TDP1-203ENST00000393454 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
TDP1-203ENST00000393454 ACAD9Q9H845 621 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 BLOC1S4Q9NUP1 217 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 PKD2L1Q9P0L9 805 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 KCNH4Q9UQ05 1017 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 STK24Q9Y6E0 443 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 POTEB3A0JP26 581 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 DCAF8L1A6NGE4 600 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 PEX10O60683 326 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 MED24O75448 989 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 HOXA7P31268 230 aaPredicted RBP9.68□□□□□ -0.86
TDP1-203ENST00000393454 ZNF75DP51815 510 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 SPIRE1Q08AE8 756 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 NCAPHQ15003 741 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 PGM5Q15124 567 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 KMT5BQ4FZB7 885 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 LDLRAD1Q5T700 205 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 PCNX4Q63HM2 1172 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 POTEBQ6S5H4 581 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 FASTKD5Q7L8L6 764 aaKnown RBP9.68□□□□□ -0.86
TDP1-203ENST00000393454 KCNK18Q7Z418 384 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 TRMT44Q8IYL2 757 aaKnown RBP9.68□□□□□ -0.86
TDP1-203ENST00000393454 SLC5A5Q92911 643 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 C7orf25Q9BPX7 421 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 PAGR1Q9BTK6 254 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 TRIM9Q9C026 710 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 LRRC27Q9C0I9 530 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 PXMP2Q9NR77 195 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 EXOC1Q9NV70 894 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 VAV3Q9UKW4 847 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 E9PMD0 336 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 DDX39AO00148 427 aaKnown RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 SLC26A4O43511 780 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 CD44P16070 742 aaKnown RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 ITGB5P18084 799 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 OSBPP22059 807 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 ERCC5P28715 1186 aaPredicted RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 STX17P56962 302 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 ZNF658Q5TYW1 1059 aaPredicted RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 LBX2Q6XYB7 198 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 DYMQ7RTS9 669 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 MB21D1Q8N884 522 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 TEKT3Q9BXF9 490 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 WDR11Q9BZH6 1224 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 ASCC2Q9H1I8 757 aaPredicted RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 AGTPBP1Q9UPW5 1226 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 LOC285556D6RIA3 1793 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 POTEFA5A3E0 1075 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 PPP1R3GB7ZBB8 358 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 IPO5O00410 1097 aaKnown RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 PSMD10O75832 226 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 CDK11BP21127 795 aaKnown RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 CCND2P30279 289 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 MRPS9P82933 396 aaKnown RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 CYP4A11Q02928 519 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 PDE4DQ08499 809 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 MKRN3Q13064 507 aaKnown RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 PABPC4Q13310 644 aaKnown RBP eCLIP9.67□□□□□ -0.86
TDP1-203ENST00000393454 SNAPC2Q13487 334 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 KCNB1Q14721 858 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 CT47A1Q5JQC4 288 aaPredicted RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 HYIQ5T013 277 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 POTEGQ6S5H5 508 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 POTEEQ6S8J3 1075 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 SARM1Q6SZW1 724 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 OTOP1Q7RTM1 612 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 NCAPG2Q86XI2 1143 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 CATSPER3Q86XQ3 398 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 ANKRD35Q8N283 1001 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 C2orf69Q8N8R5 385 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 CHST13Q8NET6 341 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 EIF2AK1Q9BQI3 630 aaKnown RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 PDCD2LQ9BRP1 358 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 GBA2Q9HCG7 927 aaPredicted RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 JADE2Q9NQC1 790 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 KCNH7Q9NS40 1196 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 BMP2KQ9NSY1 1161 aaPredicted RBP9.67□□□□□ -0.86
TDP1-203ENST00000393454 FANCLQ9NW38 375 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 BTBD7Q9P203 1132 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 CTNND2Q9UQB3 1225 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 MAPK8IP1Q9UQF2 711 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 GDAQ9Y2T3 454 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 UBIAD1Q9Y5Z9 338 aa9.67□□□□□ -0.86
TDP1-203ENST00000393454 SYNRGQ9UMZ2 1314 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 TESPA1A2RU30 521 aaPredicted RBP9.66□□□□□ -0.86
TDP1-203ENST00000393454 MYMKA6NI61 221 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 EML1O00423 815 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 KLRC4O43908 158 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 CELF2O95319 508 aaKnown RBP9.66□□□□□ -0.86
TDP1-203ENST00000393454 PLA2G4BP0C869 781 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 IDEP14735 1019 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms