RNA–Protein interactions for RNA: ENST00000393405.6

SNX11-202, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX11, Length 2,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-202ENST00000393405 TDP2O95551 362 aa16.88■□□□□ 0.29
SNX11-202ENST00000393405 HNRNPH3P31942 346 aaKnown RBP16.88■□□□□ 0.29
SNX11-202ENST00000393405 CYP27A1Q02318 531 aa16.88■□□□□ 0.29
SNX11-202ENST00000393405 SPATA4Q8NEY3 305 aa16.88■□□□□ 0.29
SNX11-202ENST00000393405 PCMTD1Q96MG8 357 aaPredicted RBP16.88■□□□□ 0.29
SNX11-202ENST00000393405 MTMR9Q96QG7 549 aa16.88■□□□□ 0.29
SNX11-202ENST00000393405 RIOX1Q9H6W3 641 aa16.88■□□□□ 0.29
SNX11-202ENST00000393405 DUSP10Q9Y6W6 482 aa16.88■□□□□ 0.29
SNX11-202ENST00000393405 MACROD2A1Z1Q3 448 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 POTEMA6NI47 508 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 MYMKA6NI61 221 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 HSF2BPO75031 334 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 NOVP48745 357 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 EIF6P56537 245 aaKnown RBP16.87■□□□□ 0.29
SNX11-202ENST00000393405 APBA1Q02410 837 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 ZSCAN29Q8IWY8 852 aaPredicted RBP16.87■□□□□ 0.29
SNX11-202ENST00000393405 LRRC47Q8N1G4 583 aaKnown RBP16.87■□□□□ 0.29
SNX11-202ENST00000393405 CALML4Q96GE6 196 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 PNMA5Q96PV4 448 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 ERGIC2Q96RQ1 377 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 RUFY1Q96T51 708 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 PAGR1Q9BTK6 254 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 LRRC1Q9BTT6 524 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 SH2D4AQ9H788 454 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 GGA1Q9UJY5 639 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 AMPD3Q01432 767 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 GLE1Q53GS7 698 aaKnown RBP16.87■□□□□ 0.29
SNX11-202ENST00000393405 DYMQ7RTS9 669 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 HINFPQ9BQA5 517 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 STIM2Q9P246 746 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 LRWD1Q9UFC0 647 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 POLLQ9UGP5 575 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 DMGDHQ9UI17 866 aaKnown RBP16.87■□□□□ 0.29
SNX11-202ENST00000393405 HYOU1Q9Y4L1 999 aa16.87■□□□□ 0.29
SNX11-202ENST00000393405 ESYT2A0FGR8 921 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 PLEKP08567 350 aaPredicted RBP16.86■□□□□ 0.29
SNX11-202ENST00000393405 PLCG2P16885 1265 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 SCP2P22307 547 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 SMARCA1P28370 1054 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 PPP1R2P41236 205 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 CENPPQ6IPU0 288 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 CCDC155Q8N6L0 562 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 PRPF38AQ8NAV1 312 aaKnown RBP16.86■□□□□ 0.29
SNX11-202ENST00000393405 NUDT12Q9BQG2 462 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 CAPN7Q9Y6W3 813 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 GAKO14976 1311 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 FOCADQ5VW36 1801 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 EPHB6O15197 1021 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 TOM1O60784 492 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 LCA5LO95447 670 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 CALCRLQ16602 461 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 CRY2Q49AN0 593 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 EMC10Q5UCC4 262 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 SV2BQ7L1I2 683 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 CCDC42Q96M95 316 aa16.86■□□□□ 0.29
SNX11-202ENST00000393405 ZNF263O14978 683 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 ATP2B4P23634 1241 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 PICALMQ13492 652 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 TTMPQ5BVD1 217 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 KRT26Q7Z3Y9 468 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 FAM163AQ96GL9 167 aaPredicted RBP16.85■□□□□ 0.29
SNX11-202ENST00000393405 ALS2CR12Q96Q35 445 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 OSBPL9Q96SU4 736 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 LRRC4BQ9NT99 713 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 MTMR4Q9NYA4 1195 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 KIF1CO43896 1103 aaKnown RBP16.85■□□□□ 0.29
SNX11-202ENST00000393405 ERCC3P19447 782 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 EZH2Q15910 746 aaKnown RBP16.85■□□□□ 0.29
SNX11-202ENST00000393405 HAUS3Q68CZ6 603 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 KCNK18Q7Z418 384 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 HDAC7Q8WUI4 952 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 LARP4BQ92615 738 aaKnown RBP16.85■□□□□ 0.29
SNX11-202ENST00000393405 DAGLAQ9Y4D2 1042 aa16.85■□□□□ 0.29
SNX11-202ENST00000393405 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.84■□□□□ 0.29
SNX11-202ENST00000393405 FSBPO95073 299 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 AKR1B1P15121 316 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 CCDC96Q2M329 555 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 YTHDF3Q7Z739 585 aaKnown RBP16.84■□□□□ 0.29
SNX11-202ENST00000393405 GPIHBP1Q8IV16 184 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 GLIS3Q8NEA6 775 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 CD248Q9HCU0 757 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 PLAGL2Q9UPG8 496 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 MYH7BA7E2Y1 1941 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNX11-202ENST00000393405 ADCY7P51828 1080 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 COBLL1Q53SF7 1204 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 TSEN2Q8NCE0 465 aaKnown RBP16.84■□□□□ 0.29
SNX11-202ENST00000393405 TBC1D16Q8TBP0 767 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 CERKQ8TCT0 537 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 IFIH1Q9BYX4 1025 aaKnown RBP16.84■□□□□ 0.29
SNX11-202ENST00000393405 GPCPD1Q9NPB8 672 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 PCDHA13Q9Y5I0 950 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 CAPN6Q9Y6Q1 641 aa16.84■□□□□ 0.29
SNX11-202ENST00000393405 NDUFAB1O14561 156 aa16.83■□□□□ 0.29
SNX11-202ENST00000393405 IBSPP21815 317 aaPredicted RBP16.83■□□□□ 0.29
SNX11-202ENST00000393405 BRD2P25440 801 aaKnown RBP16.83■□□□□ 0.29
SNX11-202ENST00000393405 FKBP15Q5T1M5 1219 aa16.83■□□□□ 0.29
SNX11-202ENST00000393405 KDM7AQ6ZMT4 941 aa16.83■□□□□ 0.29
SNX11-202ENST00000393405 MICALCLQ6ZW33 695 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms