RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 GTF2A2P52657 109 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 EHHADHQ08426 723 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 TTLL12Q14166 644 aaPredicted RBP12.22□□□□□ -0.45
PDGFD-202ENST00000393158 CALCRLQ16602 461 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 RNF207Q6ZRF8 634 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 FASTKD5Q7L8L6 764 aaKnown RBP12.22□□□□□ -0.45
PDGFD-202ENST00000393158 HHIPL1Q96JK4 782 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 CEP131Q9UPN4 1083 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 CCL15-CCL14A0A0B4J2E2 113 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 TBX3O15119 743 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 ZBED4O75132 1171 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 MED24O75448 989 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 PPP2R5CQ13362 524 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 CCL15Q16663 113 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 TKFCQ3LXA3 575 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 CEP55Q53EZ4 464 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 C11orf57Q6ZUT1 292 aaPredicted RBP12.22□□□□□ -0.45
PDGFD-202ENST00000393158 PAGE5Q96GU1 130 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 HSD17B14Q9BPX1 270 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 MXRA8Q9BRK3 442 aa12.22□□□□□ -0.45
PDGFD-202ENST00000393158 STBD1O95210 358 aa12.21□□□□□ -0.45
PDGFD-202ENST00000393158 HUNKP57058 714 aa12.21□□□□□ -0.45
PDGFD-202ENST00000393158 PRR16Q569H4 304 aa12.21□□□□□ -0.45
PDGFD-202ENST00000393158 SAMD1Q6SPF0 538 aaPredicted RBP12.21□□□□□ -0.45
PDGFD-202ENST00000393158 C2orf69Q8N8R5 385 aa12.21□□□□□ -0.45
PDGFD-202ENST00000393158 ZNF784Q8NCA9 323 aaPredicted RBP12.21□□□□□ -0.45
PDGFD-202ENST00000393158 KCNH7Q9NS40 1196 aa12.21□□□□□ -0.45
PDGFD-202ENST00000393158 KCNA2P16389 499 aa12.21□□□□□ -0.45
PDGFD-202ENST00000393158 PTGS1P23219 599 aa12.21□□□□□ -0.45
PDGFD-202ENST00000393158 SYKP43405 635 aa12.21□□□□□ -0.45
PDGFD-202ENST00000393158 ACAD9Q9H845 621 aa12.21□□□□□ -0.45
PDGFD-202ENST00000393158 AGO4Q9HCK5 861 aaKnown RBP12.21□□□□□ -0.45
PDGFD-202ENST00000393158 ISY1Q9ULR0 285 aaKnown RBP12.21□□□□□ -0.45
PDGFD-202ENST00000393158 RABGAP1Q9Y3P9 1069 aa12.21□□□□□ -0.45
PDGFD-202ENST00000393158 LAMA3Q16787 3333 aa12.21□□□□□ -0.45
PDGFD-202ENST00000393158 CCNE2O96020 404 aa12.21□□□□□ -0.46
PDGFD-202ENST00000393158 SLFN14P0C7P3 912 aa12.21□□□□□ -0.46
PDGFD-202ENST00000393158 CETPP11597 493 aa12.21□□□□□ -0.46
PDGFD-202ENST00000393158 NIPA1Q7RTP0 329 aa12.21□□□□□ -0.46
PDGFD-202ENST00000393158 CHST13Q8NET6 341 aa12.21□□□□□ -0.46
PDGFD-202ENST00000393158 NUP62CLQ9H1M0 184 aa12.21□□□□□ -0.46
PDGFD-202ENST00000393158 KIAA1468Q9P260 1216 aa12.21□□□□□ -0.46
PDGFD-202ENST00000393158 TXKP42681 527 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 PSMC6P62333 389 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 IQCB1Q15051 598 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 RGMBQ6NW40 437 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 USP6NLQ92738 828 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 PANK2Q9BZ23 570 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 EFCC1Q9HA90 598 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 JADE2Q9NQC1 790 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 COBLO75128 1261 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 SPDYE3A6NKU9 549 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 PLCG1P19174 1290 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 TM4SF4P48230 202 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 ARSHQ5FYA8 562 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 MCTP2Q6DN12 878 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 DTHD1Q6ZMT9 781 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 CATSPER3Q86XQ3 398 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 AK8Q96MA6 479 aa12.2□□□□□ -0.46
PDGFD-202ENST00000393158 ZBTB39O15060 712 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 ADCY6O43306 1168 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 EIF2AK2P19525 551 aaKnown RBP12.19□□□□□ -0.46
PDGFD-202ENST00000393158 NCAPHQ15003 741 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 ZNF792Q3KQV3 632 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 DPCR1Q3MIW9 517 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 CNNM4Q6P4Q7 775 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 C17orf99Q6UX52 265 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 MCF2L2Q86YR7 1114 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 IFNL1Q8IU54 200 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 DHX40Q8IX18 779 aaKnown RBP12.19□□□□□ -0.46
PDGFD-202ENST00000393158 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 UNC45AQ9H3U1 944 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 GPBP1L1Q9HC44 474 aaPredicted RBP12.19□□□□□ -0.46
PDGFD-202ENST00000393158 PGK2P07205 417 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
PDGFD-202ENST00000393158 ALDH5A1P51649 535 aaPredicted RBP12.19□□□□□ -0.46
PDGFD-202ENST00000393158 CUL4BQ13620 913 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 JMYQ8N9B5 988 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 PRDM10Q9NQV6 1147 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 PCDHA5Q9Y5H7 936 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 SLITRK3O94933 977 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 ARIH2O95376 493 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 XRCC6P12956 609 aaKnown RBP eCLIP12.19□□□□□ -0.46
PDGFD-202ENST00000393158 PDILTQ8N807 584 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 PCDHA2Q9Y5H9 948 aa12.19□□□□□ -0.46
PDGFD-202ENST00000393158 TOMM70O94826 608 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 TYRO3Q06418 890 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 MORC3Q14149 939 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 ANKRD13CQ8N6S4 541 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 SHCBP1Q8NEM2 672 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 SLC12A3P55017 1021 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 GRB14Q14449 540 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 STAMQ92783 540 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 DNAJC19Q96DA6 116 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 CEP89Q96ST8 783 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 RASSF10A6NK89 507 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 NR3C2P08235 984 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 UGCGQ16739 394 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 SMC1BQ8NDV3 1235 aa12.18□□□□□ -0.46
PDGFD-202ENST00000393158 FAM20AQ96MK3 541 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms