RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 CCDC93Q567U6 631 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 TTBK2Q6IQ55 1244 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 FMO2Q99518 471 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 GJB4Q9NTQ9 266 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 GCNT4Q9P109 453 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 LEMD3Q9Y2U8 911 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 SGK1O00141 431 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 PIK3CAP42336 1068 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 SNX1Q13596 522 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 SEPT2Q15019 361 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 RESP18Q5W5W9 173 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 HACE1Q8IYU2 909 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 WDR11Q9BZH6 1224 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 ANKFY1Q9P2R3 1169 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 CCPG1Q9ULG6 757 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 SERPINB6P35237 376 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 HIBCHQ6NVY1 386 aaPredicted RBP14.24□□□□□ -0.13
LCA5-202ENST00000392959 ALKBH5Q6P6C2 394 aaKnown RBP14.24□□□□□ -0.13
LCA5-202ENST00000392959 SLC17A8Q8NDX2 589 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 ANAPC5Q9UJX4 755 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 MBD5Q9P267 1494 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 METP08581 1390 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 RASGRF2O14827 1237 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 EIF3BP55884 814 aaKnown RBP14.24□□□□□ -0.13
LCA5-202ENST00000392959 USPL1Q5W0Q7 1092 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 RINT1Q6NUQ1 792 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 SCYL1Q96KG9 808 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 ACTR5Q9H9F9 607 aaPredicted RBP14.24□□□□□ -0.13
LCA5-202ENST00000392959 DISC1Q9NRI5 854 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 PCDHB4Q9Y5E5 795 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 XDHP47989 1333 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 RBBP5Q15291 538 aaKnown RBP14.24□□□□□ -0.13
LCA5-202ENST00000392959 SLFNL1Q499Z3 407 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 COA7Q96BR5 231 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 NACC1Q96RE7 527 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 AS3MTQ9HBK9 375 aa14.24□□□□□ -0.13
LCA5-202ENST00000392959 CRKLP46109 303 aaKnown RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 NLRP10Q86W26 655 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 OSBPL5Q9H0X9 879 aaPredicted RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 SERPINB13Q9UIV8 391 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 GDAQ9Y2T3 454 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 ARHGEF5Q12774 1597 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 TTC37Q6PGP7 1564 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 HMGB1P1B2RPK0 211 aaPredicted RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 TCP10L2B9ZVM9 353 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 M0QZ92 97 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 GPC4O75487 556 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 GARSP41250 739 aaKnown RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 ASPHQ12797 758 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 ZNF577Q9BSK1 485 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 CPSF1Q10570 1443 aaKnown RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 GSTA1P08263 222 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 GSTA2P09210 222 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 RCN2Q14257 317 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 USP17L2Q6R6M4 530 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 ACCSQ96QU6 501 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 ZNF277Q9NRM2 450 aaPredicted RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 NRBP2Q9NSY0 501 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 NFU1Q9UMS0 254 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 SAMD9Q5K651 1589 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 EIF3CLB5ME19 914 aaKnown RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 COG7P83436 770 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 PDE1CQ14123 709 aaPredicted RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 CC2D1AQ6P1N0 951 aaPredicted RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 KCTD1Q719H9 257 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 TRIM42Q8IWZ5 723 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 SPICE1Q8N0Z3 855 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 NME8Q8N427 588 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 ATP6V0A1Q93050 837 aa14.23□□□□□ -0.13
LCA5-202ENST00000392959 STRBPQ96SI9 672 aaKnown RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 EIF3CQ99613 913 aaKnown RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 PIH1D3Q9NQM4 214 aaKnown RBP14.23□□□□□ -0.13
LCA5-202ENST00000392959 ADGBQ8N7X0 1667 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 CYP2D7A0A087X1C5 515 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 FRMD3A2A2Y4 597 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 SAT1P21673 171 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 SLC16A2P36021 539 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 CLEC17AQ6ZS10 378 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 FMR1NBQ8N0W7 255 aaPredicted RBP14.22□□□□□ -0.13
LCA5-202ENST00000392959 PDCD7Q8N8D1 485 aaKnown RBP14.22□□□□□ -0.13
LCA5-202ENST00000392959 KANSL2Q9H9L4 492 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 CCDC188H7C350 402 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 MEIS1O00470 390 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 PLA2G4BP0C869 781 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 USP6P35125 1406 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 CUL1Q13616 776 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 TMED2Q15363 201 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 FAM81BQ96LP2 452 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 TMEM206Q9H813 350 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 SEPT10Q9P0V9 454 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 SORBS3O60504 671 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 MXI1P50539 228 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 GYS2P54840 703 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 UBXN2AP68543 259 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 RASGRF1Q13972 1273 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 PPP2R5AQ15172 486 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 FAM133BQ5BKY9 247 aaKnown RBP14.22□□□□□ -0.13
LCA5-202ENST00000392959 TOGARAM2Q6ZUX3 1019 aa14.22□□□□□ -0.13
LCA5-202ENST00000392959 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.22□□□□□ -0.13
LCA5-202ENST00000392959 AP1M1Q9BXS5 423 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms