RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 PCNX4Q63HM2 1172 aa17.12■□□□□ 0.33
SNRPN-202ENST00000390687 XRRA1Q6P2D8 792 aa17.12■□□□□ 0.33
SNRPN-202ENST00000390687 C16orf59Q7L2K0 433 aa17.12■□□□□ 0.33
SNRPN-202ENST00000390687 HIPK3Q9H422 1215 aa17.12■□□□□ 0.33
SNRPN-202ENST00000390687 CCDC196A0A1B0GTZ2 297 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 PPFIA4O75335 1185 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 SUPT20HL2P0C7V6 817 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 CSF2RAP15509 400 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 CHMP4BP1P59074 171 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 SEMA3FQ13275 785 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 GNPTABQ3T906 1256 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 FAM47CQ5HY64 1035 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 TMEM199Q8N511 208 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 SPATA33Q96N06 139 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 TM6SF1Q9BZW5 370 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 UMODL1Q5DID0 1318 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 STXBP3O00186 592 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 CYP2C9P11712 490 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 HOXD8P13378 290 aaPredicted RBP17.11■□□□□ 0.33
SNRPN-202ENST00000390687 PDIA3P30101 505 aaKnown RBP17.11■□□□□ 0.33
SNRPN-202ENST00000390687 NAPAP54920 295 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 TOB2Q14106 344 aaPredicted RBP17.11■□□□□ 0.33
SNRPN-202ENST00000390687 GPR153Q6NV75 609 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 NOC4LQ9BVI4 516 aaKnown RBP17.11■□□□□ 0.33
SNRPN-202ENST00000390687 MLXIPQ9HAP2 919 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 BARHL2Q9NY43 387 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 CYP46A1Q9Y6A2 500 aa17.11■□□□□ 0.33
SNRPN-202ENST00000390687 SPDYE3A6NKU9 549 aa17.1■□□□□ 0.33
SNRPN-202ENST00000390687 FIBPO43427 364 aa17.1■□□□□ 0.33
SNRPN-202ENST00000390687 PTPN11Q06124 597 aaPredicted RBP17.1■□□□□ 0.33
SNRPN-202ENST00000390687 PPIGQ13427 754 aaKnown RBP eCLIP17.1■□□□□ 0.339e-11■□□□□ 10.2
SNRPN-202ENST00000390687 NTRK3Q16288 839 aa17.1■□□□□ 0.33
SNRPN-202ENST00000390687 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNRPN-202ENST00000390687 UPF3BQ9BZI7 483 aaKnown RBP17.1■□□□□ 0.33
SNRPN-202ENST00000390687 RIC8AQ9NPQ8 531 aa17.1■□□□□ 0.33
SNRPN-202ENST00000390687 NID2Q14112 1375 aa17.09■□□□□ 0.33
SNRPN-202ENST00000390687 SMCO2A6NFE2 343 aa17.09■□□□□ 0.33
SNRPN-202ENST00000390687 ZNF286BP0CG31 522 aa17.09■□□□□ 0.33
SNRPN-202ENST00000390687 CCL23P55773 120 aa17.09■□□□□ 0.33
SNRPN-202ENST00000390687 PKN1Q16512 942 aa17.09■□□□□ 0.33
SNRPN-202ENST00000390687 PFKFB3Q16875 520 aaPredicted RBP17.09■□□□□ 0.33
SNRPN-202ENST00000390687 PPP1R18Q6NYC8 613 aa17.09■□□□□ 0.33
SNRPN-202ENST00000390687 CYFIP1Q7L576 1253 aa17.09■□□□□ 0.33
SNRPN-202ENST00000390687 hCG_1984214I3L0E3 225 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 HAS3O00219 553 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 PRPF3O43395 683 aaKnown RBP17.08■□□□□ 0.32
SNRPN-202ENST00000390687 F2P00734 622 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 ACRP10323 421 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 ITGB5P18084 799 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 PSEN2P49810 448 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 CCT2P78371 535 aaKnown RBP17.08■□□□□ 0.32
SNRPN-202ENST00000390687 NEDD9Q14511 834 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 TMEM240Q5SV17 173 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 NLRX1Q86UT6 975 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 SESTD1Q86VW0 696 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 TEX2Q8IWB9 1127 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 ZNF713Q8N859 430 aaPredicted RBP17.08■□□□□ 0.32
SNRPN-202ENST00000390687 PHKBQ93100 1093 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 SENP7Q9BQF6 1050 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 LARP6Q9BRS8 491 aaKnown RBP17.08■□□□□ 0.32
SNRPN-202ENST00000390687 WNT8AQ9H1J5 351 aa17.08■□□□□ 0.32
SNRPN-202ENST00000390687 ATP9AO75110 1047 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 PPFIA3O75145 1194 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 SCG2P13521 617 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 ADCY7P51828 1080 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 GDF6Q6KF10 455 aaPredicted RBP17.07■□□□□ 0.32
SNRPN-202ENST00000390687 METTL7BQ6UX53 244 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 ZNF365Q70YC5 407 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 RNPC3Q96LT9 517 aaKnown RBP17.07■□□□□ 0.32
SNRPN-202ENST00000390687 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 C16orf70Q9BSU1 422 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 ALG1Q9BT22 464 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 NCOA5Q9HCD5 579 aaKnown RBP17.07■□□□□ 0.32
SNRPN-202ENST00000390687 IL23AQ9NPF7 189 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 HDAC6Q9UBN7 1215 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 TELO2Q9Y4R8 837 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 UBIAD1Q9Y5Z9 338 aa17.07■□□□□ 0.32
SNRPN-202ENST00000390687 IFNAR1P17181 557 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 CLK2P49760 499 aaKnown RBP17.06■□□□□ 0.32
SNRPN-202ENST00000390687 MFSD10Q14728 455 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 PTGISQ16647 500 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 Q7L0L9 218 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 DEFB123Q8N688 67 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 C7orf31Q8N865 590 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 GPRASP2Q96D09 838 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 VWCEQ96DN2 955 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 ZNF274Q96GC6 653 aaPredicted RBP17.06■□□□□ 0.32
SNRPN-202ENST00000390687 SCLYQ96I15 445 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 PGBD1Q96JS3 809 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 GPR20Q99678 358 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 KATNAL1Q9BW62 490 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 JADE2Q9NQC1 790 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 TMEM260Q9NX78 707 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 FOSP01100 380 aaPredicted RBP17.06■□□□□ 0.32
SNRPN-202ENST00000390687 KCNA2P16389 499 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 CYP2W1Q8TAV3 490 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms