RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 ARHGAP1Q07960 439 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 TRIM29Q14134 588 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 DHX37Q8IY37 1157 aaKnown RBP17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 RASGRP4Q8TDF6 673 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 EMID1Q96A84 441 aaPredicted RBP17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 FERMT2Q96AC1 680 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 TMX3Q96JJ7 454 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 GLT1D1Q96MS3 346 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 BRMS1Q9HCU9 246 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 JADE2Q9NQC1 790 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 STARD7Q9NQZ5 370 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 KCNJ14Q9UNX9 436 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 UBIAD1Q9Y5Z9 338 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 SPATA31C2B4DYI2 1134 aa17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 MAFGO15525 162 aa17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 CABYRO75952 493 aa17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 CD2BP2O95400 341 aaKnown RBP17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 ITGB5P18084 799 aa17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 ZNF76P36508 570 aa17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 MTMR1Q13613 665 aa17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 LAMC2Q13753 1193 aa17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 NEDD9Q14511 834 aa17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 DPF3Q92784 378 aa17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 MXRA8Q9BRK3 442 aa17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 POLR3EQ9NVU0 708 aa17.15■□□□□ 0.34
IGHV3-53-201ENST00000390627 A6NJR5 290 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 ADAMTS3O15072 1205 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 KPNA6O60684 536 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 GGPS1O95749 300 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 CYP3A4P08684 503 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 ATN1P54259 1190 aaPredicted RBP17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 SEMA3FQ13275 785 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 NPY5RQ15761 445 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 CEP55Q53EZ4 464 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 CELF3Q5SZQ8 465 aaKnown RBP17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 FAM184AQ8NB25 1140 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 GIMAP8Q8ND71 665 aaPredicted RBP17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 PPTC7Q8NI37 304 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 AFG1LQ8WV93 481 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 SENP7Q9BQF6 1050 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 MLXIPQ9HAP2 919 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 ELP1O95163 1332 aa17.14■□□□□ 0.33
IGHV3-53-201ENST00000390627 M0R2N6 131 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 EVI5O60447 810 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 MMP3P08254 477 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 KRT2P35908 639 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 C1orf53Q5VUE5 145 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 MYSM1Q5VVJ2 828 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 METTL7BQ6UX53 244 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 CXCL17Q6UXB2 119 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 SLC39A5Q6ZMH5 540 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 NIPA1Q7RTP0 329 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 KRT25Q7Z3Z0 450 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 CRYGNQ8WXF5 182 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 VTI1AQ96AJ9 217 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 SPATA33Q96N06 139 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 GJB4Q9NTQ9 266 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 KIF3AQ9Y496 699 aa17.13■□□□□ 0.33
IGHV3-53-201ENST00000390627 A0A0U1RQG5 324 aaPredicted RBP17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 CCDC194A0A1B0GVG4 234 aa17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 MYL3P08590 195 aa17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 SETQ01105 290 aaPredicted RBP17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 SP2Q02086 613 aa17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 SNX17Q15036 470 aa17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 DGKDQ16760 1214 aa17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 LRRC26Q2I0M4 334 aa17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 TBCKQ8TEA7 893 aa17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 C8orf76Q96K31 380 aa17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 MTG1Q9BT17 334 aaPredicted RBP17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 NR2E3Q9Y5X4 410 aa17.12■□□□□ 0.33
IGHV3-53-201ENST00000390627 MEIS1O00470 390 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 MMP1P03956 469 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 KCNA2P16389 499 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 CIITAP33076 1130 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 USP11P51784 963 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 FOSBP53539 338 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 RTP1P59025 263 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 PURAQ00577 322 aaKnown RBP17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 SAFBQ15424 915 aaKnown RBP eCLIP17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 KRT40Q6A162 431 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 CYFIP1Q7L576 1253 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 PLA2G4DQ86XP0 818 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 SEZ6LQ9BYH1 1024 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 KCNH7Q9NS40 1196 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 MYH7BA7E2Y1 1941 aa17.11■□□□□ 0.33
IGHV3-53-201ENST00000390627 FAM86B1E9PN63 330 aa17.1■□□□□ 0.33
IGHV3-53-201ENST00000390627 SORBS3O60504 671 aa17.1■□□□□ 0.33
IGHV3-53-201ENST00000390627 FAM86B2P0C5J1 330 aa17.1■□□□□ 0.33
IGHV3-53-201ENST00000390627 HSDL1Q3SXM5 330 aa17.1■□□□□ 0.33
IGHV3-53-201ENST00000390627 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
IGHV3-53-201ENST00000390627 C7orf61Q8IZ16 206 aa17.1■□□□□ 0.33
IGHV3-53-201ENST00000390627 CYP2W1Q8TAV3 490 aa17.1■□□□□ 0.33
IGHV3-53-201ENST00000390627 SDF4Q9BRK5 362 aa17.1■□□□□ 0.33
IGHV3-53-201ENST00000390627 ATP11BQ9Y2G3 1177 aa17.1■□□□□ 0.33
IGHV3-53-201ENST00000390627 MROH7Q68CQ1 1323 aa17.1■□□□□ 0.33
IGHV3-53-201ENST00000390627 ALPK3Q96L96 1907 aa17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 IGLV3-22A0A075B6J6 115 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms