RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 F2P00734 622 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 CFBP00751 764 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 PARP1P09874 1014 aaKnown RBP11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 ZNF286BP0CG31 522 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 TGFB3P10600 412 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 THPOP40225 353 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 PDE1AP54750 535 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 TRAF1Q13077 416 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 SAMD3Q8N6K7 520 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 SEPT8Q92599 483 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 SPATA33Q96N06 139 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 YME1L1Q96TA2 773 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 ZKSCAN3Q9BRR0 538 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 VAT1LQ9HCJ6 419 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 CD320Q9NPF0 282 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 C11orf16Q9NQ32 467 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 PXMP2Q9NR77 195 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 MAP3K20Q9NYL2 800 aaKnown RBP11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 LCTP09848 1927 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 CCDC171Q6TFL3 1326 aa11.32□□□□□ -0.6
TRAV13-2-201ENST00000390439 A0A0D9SFI3 127 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 GRXCR2A6NFK2 248 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 NCK2O43639 380 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 GNAT1P11488 350 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 MYCLP12524 364 aaPredicted RBP11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 NMIQ13287 307 aaPredicted RBP11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 TRIM71Q2Q1W2 868 aaKnown RBP11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 QRICH1Q2TAL8 776 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 CELF3Q5SZQ8 465 aaKnown RBP11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 EP400NLQ6ZTU2 488 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 ALYREFQ86V81 257 aaKnown RBP11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 BANK1Q8NDB2 785 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 DBF4BQ8NFT6 615 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 ATP6V0A1Q93050 837 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 C17orf80Q9BSJ5 609 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 AMNQ9BXJ7 453 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 UPF3BQ9BZI7 483 aaKnown RBP11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 CPVLQ9H3G5 476 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 MLXIPQ9HAP2 919 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 COL20A1Q9P218 1284 aa11.31□□□□□ -0.6
TRAV13-2-201ENST00000390439 TANC1Q9C0D5 1861 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 C17orf102A2RUQ5 167 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 DCXO43602 365 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 CAND2O75155 1236 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 KDM4AO75164 1064 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 HOXD8P13378 290 aaPredicted RBP11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 HTRA4P83105 476 aaPredicted RBP11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 ZNF200P98182 395 aaPredicted RBP11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 GPM6BQ13491 265 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 TCTN1Q2MV58 587 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 EPC2Q52LR7 807 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 MYSM1Q5VVJ2 828 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 SERINC5Q86VE9 423 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 ANKS1AQ92625 1134 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 RILPL2Q969X0 211 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 ZSCAN10Q96SZ4 725 aaPredicted RBP11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 KCNH6Q9H252 994 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 PRKAG3Q9UGI9 489 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 SALL3Q9BXA9 1300 aa11.3□□□□□ -0.6
TRAV13-2-201ENST00000390439 H3BNC9 293 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 GGPS1O95749 300 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 IL9P15248 144 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 CCND2P30279 289 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 HSD17B4P51659 736 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 MBTPS1Q14703 1052 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 PLEKHG4Q58EX7 1191 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 ZNF589Q86UQ0 364 aaPredicted RBP11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 TMEM192Q8IY95 271 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 NEK9Q8TD19 979 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 SP7Q8TDD2 431 aaPredicted RBP11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 APBB2Q92870 758 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 TOP1MTQ969P6 601 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 PABPC5Q96DU9 382 aaKnown RBP11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 PDCD2LQ9BRP1 358 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 UBAC1Q9BSL1 405 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 KRT23Q9C075 422 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 NSUN3Q9H649 340 aaKnown RBP11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 JMJD4Q9H9V9 463 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 PCDHA1Q9Y5I3 950 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 REV3LO60673 3130 aa11.29□□□□□ -0.6
TRAV13-2-201ENST00000390439 H3BQ06 376 aaPredicted RBP11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 H3BRB1 525 aa11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 NOP56O00567 594 aaKnown RBP11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 UPP2O95045 317 aa11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 IMMTQ16891 758 aaKnown RBP11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 HSDL1Q3SXM5 330 aa11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 STOX1Q6ZVD7 989 aa11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 VSIG10LQ86VR7 867 aa11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 WNT8BQ93098 351 aa11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 USP26Q9BXU7 913 aa11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 IFIH1Q9BYX4 1025 aaKnown RBP11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 TUT1Q9H6E5 874 aaKnown RBP11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 CNNM2Q9H8M5 875 aa11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 RWDD3Q9Y3V2 267 aa11.28□□□□□ -0.6
TRAV13-2-201ENST00000390439 NEDD4P46934 1319 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms