RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 HERVK_113P62684 666 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 MCM6Q14566 821 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 PGM5Q15124 567 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 FAM20AQ96MK3 541 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 MXRA8Q9BRK3 442 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 ACAD9Q9H845 621 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 PXMP2Q9NR77 195 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 VAV3Q9UKW4 847 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 POTEB3A0JP26 581 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 EML1O00423 815 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 MED24O75448 989 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 ADCY5O95622 1261 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 TERF1P54274 439 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 ARHGEF16Q5VV41 709 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 POTEBQ6S5H4 581 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 PDLIM2Q96JY6 352 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 MAP3K20Q9NYL2 800 aaKnown RBP13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 CYP39A1Q9NYL5 469 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 A0A0G2JMZ2 1700 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 LCTP09848 1927 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 GOLGA6L19H0YKK7 550 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 CHMP2AO43633 222 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 SNAPC2Q13487 334 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 TMEM119Q4V9L6 283 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 LRCH2Q5VUJ6 765 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 PCNX4Q63HM2 1172 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 GSDMAQ96QA5 445 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 PDCD2LQ9BRP1 358 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 ZNF577Q9BSK1 485 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 TXNRD2Q9NNW7 524 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 KIAA1024Q9UPX6 916 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 CNMDO75829 334 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 PSMD10O75832 226 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 RPN1P04843 607 aaKnown RBP13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 TKFCQ3LXA3 575 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 CST9Q5W186 159 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 FASTKD5Q7L8L6 764 aaKnown RBP13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 C2orf69Q8N8R5 385 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 LARP4BQ92615 738 aaKnown RBP13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 SLC5A5Q92911 643 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 SPATC1LQ9H0A9 340 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 KCNH7Q9NS40 1196 aa13.68□□□□□ -0.22
SPTBN1-203ENST00000389980 KIAA1217Q5T5P2 1943 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 FRMPD4Q14CM0 1322 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 POTEFA5A3E0 1075 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 E9PMD0 336 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 DDX39AO00148 427 aaKnown RBP13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 CYP2C8P10632 490 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 CYP4A11Q02928 519 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 NCAPHQ15003 741 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 POTEGQ6S5H5 508 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 OTOP1Q7RTM1 612 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 NCAPG2Q86XI2 1143 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 CATSPER3Q86XQ3 398 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 SAMD3Q8N6K7 520 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 TRIML1Q8N9V2 468 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 RAD54LQ92698 747 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 BPIFA3Q9BQP9 254 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 CUEDC2Q9H467 287 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 UBIAD1Q9Y5Z9 338 aa13.67□□□□□ -0.22
SPTBN1-203ENST00000389980 IPO5O00410 1097 aaKnown RBP13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 KLRC4O43908 158 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 GAS7O60861 476 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 ITGBL1O95965 494 aaPredicted RBP13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 SETQ01105 290 aaPredicted RBP13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 CNTN2Q02246 1040 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 Q3C1V9 767 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 KLHL10Q6JEL2 608 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 SV2BQ7L1I2 683 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 TRMT44Q8IYL2 757 aaKnown RBP13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 MB21D1Q8N884 522 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 MS4A4AQ96JQ5 239 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 MOV10L1Q9BXT6 1211 aaKnown RBP13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 TRIM9Q9C026 710 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 RGL1Q9NZL6 768 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 STK17AQ9UEE5 414 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 RABGAP1Q9Y3P9 1069 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 TESPA1A2RU30 521 aaPredicted RBP13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 MYMKA6NI61 221 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 COBLO75128 1261 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 NR3C2P08235 984 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 SPATA31C1P0DKV0 1188 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 PSMC6P62333 389 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 KMT5BQ4FZB7 885 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 HYIQ5T013 277 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 RIOX2Q8IUF8 465 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 ANKRD35Q8N283 1001 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 MLKLQ8NB16 471 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 MAPK8IP1Q9UQF2 711 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 GDAQ9Y2T3 454 aa13.66□□□□□ -0.22
SPTBN1-203ENST00000389980 CCL15-CCL14A0A0B4J2E2 113 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 SSBP05455 408 aaKnown RBP eCLIP13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 OSBPP22059 807 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 FKBP1BP68106 108 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 ASIC1P78348 528 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 MTMR1Q13613 665 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms