RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 IRAK3Q9Y616 596 aa3.6□□□□□ -1.83
RNU6-541P-201ENST00000384709 KDM2BQ8NHM5 1336 aa3.6□□□□□ -1.83
RNU6-541P-201ENST00000384709 TCRBV5S2A0A599 114 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 SH3D21A4FU49 640 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 ARVCFO00192 962 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 RFXAPO00287 272 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 AQP7O14520 342 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 HGSO14964 777 aaPredicted RBP3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 PLA2G1BP04054 148 aaKnown RBP3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 NAT1P18440 290 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 PMLP29590 882 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 EPHA5P54756 1037 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 FOXO4P98177 505 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 DLX2Q07687 328 aaPredicted RBP3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 KIZQ2M2Z5 673 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 VWA3BQ502W6 1294 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 USP53Q70EK8 1073 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 OTOP3Q7RTS5 596 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 SAPCD2Q86UD0 394 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 ALG3Q92685 438 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 SRPK1Q96SB4 655 aaKnown RBP3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 MRPL4Q9BYD3 311 aaKnown RBP3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 LNPKQ9C0E8 428 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 AP5M1Q9H0R1 490 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 SMOC1Q9H4F8 434 aa3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 NGRNQ9NPE2 291 aaKnown RBP3.59□□□□□ -1.83
RNU6-541P-201ENST00000384709 EFCAB14O75071 495 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 DGKIO75912 1065 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 PI3P19957 117 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 BUD31P41223 144 aaPredicted RBP3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 CR1LQ2VPA4 569 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 CIAPIN1Q6FI81 312 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 CNKSR3Q6P9H4 555 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 NLGN1Q8N2Q7 840 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 LINC01356Q8N9X3 169 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 TP53I13Q8NBR0 393 aaPredicted RBP3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 ZSWIM2Q8NEG5 633 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 UHMK1Q8TAS1 419 aaKnown RBP3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 PMFBP1Q8TBY8 1022 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 PANK1Q8TE04 598 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 USP33Q8TEY7 942 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 FNIP1Q8TF40 1166 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 DNAJC2Q99543 621 aaKnown RBP3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 CLDND1Q9NY35 253 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 PPARGC1AQ9UBK2 798 aaKnown RBP3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 ASH2LQ9UBL3 628 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 PPP1R1BQ9UD71 204 aaPredicted RBP3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 PFDN2Q9UHV9 154 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 DBR1Q9UK59 544 aaKnown RBP3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 PALD1Q9ULE6 856 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 COA3Q9Y2R0 106 aaPredicted RBP3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 SIT1Q9Y3P8 196 aa3.58□□□□□ -1.84
RNU6-541P-201ENST00000384709 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 BLACEA4D250 179 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 MAFKO60675 156 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 C8BP07358 591 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 GRK2P25098 689 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 GRK3P35626 688 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 PRR31Q5SQ13 230 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 STEAP3Q658P3 488 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 CDC6Q99741 560 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 RXFP1Q9HBX9 757 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 SPATA6Q9NWH7 488 aaPredicted RBP3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 TMEM260Q9NX78 707 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 DTLQ9NZJ0 730 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 PTCH2Q9Y6C5 1203 aa3.57□□□□□ -1.84
RNU6-541P-201ENST00000384709 TCRBV5S4A2TA0A5A2 114 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 FAM47E-STBD1D6RA91 191 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 FFAR3O14843 346 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 PLD2O14939 933 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 NUAK1O60285 661 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 RFPL3O75679 317 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 NPTXRO95502 500 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 LRG1P02750 347 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 SOD2P04179 222 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 ZSCAN22P10073 491 aaPredicted RBP3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 KCNA6P17658 529 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 MC3RP41968 323 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 AFF3P51826 1226 aaKnown RBP3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 NCKAP1LP55160 1127 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 LACTBP83111 547 aaPredicted RBP3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 SQSTM1Q13501 440 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 CCDC144BQ3MJ40 725 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 FNDC3BQ53EP0 1204 aaKnown RBP3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 TCERG1LQ5VWI1 586 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 ETV3LQ6ZN32 361 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 C16orf59Q7L2K0 433 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 MILR1Q7Z6M3 343 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 PROSER1Q86XN7 944 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 SYNPOQ8N3V7 929 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 MARCH10Q8NA82 808 aaPredicted RBP3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 PCDH19Q8TAB3 1148 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 SMARCC2Q8TAQ2 1214 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 SLC7A14Q8TBB6 771 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 SH3RF2Q8TEC5 729 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 NOX5Q96PH1 765 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 KCNC2Q96PR1 638 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 C11orf84Q9BUA3 381 aaPredicted RBP3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 IPPKQ9H8X2 491 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 LUC7LQ9NQ29 371 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms