RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 CCDC112Q8NEF3 446 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 NEK9Q8TD19 979 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 ZKSCAN4Q969J2 545 aaPredicted RBP15.16■□□□□ 0.02
SEC13-203ENST00000383801 AGBL1Q96MI9 1066 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 MXRA8Q9BRK3 442 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 KCNF1Q9H3M0 494 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 KCND1Q9NSA2 647 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 SAMSN1Q9NSI8 373 aaKnown RBP15.16■□□□□ 0.02
SEC13-203ENST00000383801 NRBP1Q9UHY1 535 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 SCAF8Q9UPN6 1271 aaKnown RBP15.16■□□□□ 0.02
SEC13-203ENST00000383801 DNM3Q9UQ16 869 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 PARP14Q460N5 1801 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 MYMKA6NI61 221 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 UNCXA6NJT0 531 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 PSMD10O75832 226 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 NF2P35240 595 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 IREB2P48200 963 aaKnown RBP15.15■□□□□ 0.02
SEC13-203ENST00000383801 EHHADHQ08426 723 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 MCM6Q14566 821 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 C9orf131Q5VYM1 1079 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 SPECC1LQ69YQ0 1117 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.15■□□□□ 0.02
SEC13-203ENST00000383801 TMC6Q7Z403 805 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 FILIP1Q7Z7B0 1213 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 CCDC65Q8IXS2 484 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 CACTINQ8WUQ7 758 aaKnown RBP15.15■□□□□ 0.02
SEC13-203ENST00000383801 TBC1D5Q92609 795 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 DDX12PQ92771 950 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 NAP1L5Q96NT1 182 aaPredicted RBP15.15■□□□□ 0.02
SEC13-203ENST00000383801 NUDT12Q9BQG2 462 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 VAV3Q9UKW4 847 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 KIAA1024Q9UPX6 916 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 CTNND2Q9UQB3 1225 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 SMCHD1A6NHR9 2005 aa15.15■□□□□ 0.02
SEC13-203ENST00000383801 OFD1O75665 1012 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 PLA2G4BP0C869 781 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 SFPQP23246 707 aaKnown RBP eCLIP15.14■□□□□ 0.01
SEC13-203ENST00000383801 CENPPQ6IPU0 288 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 CATSPER3Q86XQ3 398 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 TRMT44Q8IYL2 757 aaKnown RBP15.14■□□□□ 0.01
SEC13-203ENST00000383801 SYT2Q8N9I0 419 aaPredicted RBP15.14■□□□□ 0.01
SEC13-203ENST00000383801 P2RX5Q93086 422 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 ZNF830Q96NB3 372 aaPredicted RBP15.14■□□□□ 0.01
SEC13-203ENST00000383801 KCND2Q9NZV8 630 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 ADD3Q9UEY8 706 aaKnown RBP15.14■□□□□ 0.01
SEC13-203ENST00000383801 GDAQ9Y2T3 454 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 CSADQ9Y600 493 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 RBBP6Q7Z6E9 1792 aaKnown RBP15.14■□□□□ 0.01
SEC13-203ENST00000383801 SSC5DA1L4H1 1573 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 POLR2AP24928 1970 aaKnown RBP15.14■□□□□ 0.01
SEC13-203ENST00000383801 ITIH6Q6UXX5 1313 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 ALAS1P13196 640 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 LRRC63Q05C16 580 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 PPATQ06203 517 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 EPHA7Q15375 998 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 ECM1Q16610 540 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 TCP11X2Q5H9J9 407 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 LRCH2Q5VUJ6 765 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 B3GNT9Q6UX72 402 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 APTXQ7Z2E3 356 aaKnown RBP15.14■□□□□ 0.01
SEC13-203ENST00000383801 SMYD4Q8IYR2 804 aaPredicted RBP15.14■□□□□ 0.01
SEC13-203ENST00000383801 MB21D1Q8N884 522 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 REPS2Q8NFH8 660 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 SYTL5Q8TDW5 730 aaPredicted RBP15.14■□□□□ 0.01
SEC13-203ENST00000383801 DNAJC19Q96DA6 116 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 TRERF1Q96PN7 1200 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 HSD17B14Q9BPX1 270 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 TEKT3Q9BXF9 490 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 RAVER2Q9HCJ3 691 aaKnown RBP15.14■□□□□ 0.01
SEC13-203ENST00000383801 RTN4Q9NQC3 1192 aaKnown RBP15.14■□□□□ 0.01
SEC13-203ENST00000383801 TBC1D22BQ9NU19 505 aa15.14■□□□□ 0.01
SEC13-203ENST00000383801 FRMD3A2A2Y4 597 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 CXCL11O14625 94 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 GRIN3BO60391 1043 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 GAS7O60861 476 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 MED24O75448 989 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 STAM2O75886 525 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 SPATA31C1P0DKV0 1188 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 PRKCSHP14314 528 aaPredicted RBP15.13■□□□□ 0.01
SEC13-203ENST00000383801 YBX3P16989 372 aaKnown RBP eCLIP15.13■□□□□ 0.019e-10■■□□□ 14.4
SEC13-203ENST00000383801 HMGCS2P54868 508 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 SLC12A3P55017 1021 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 STX17P56962 302 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 STK4Q13043 487 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 TBX2Q13207 712 aaPredicted RBP15.13■□□□□ 0.01
SEC13-203ENST00000383801 NCAPH2Q6IBW4 605 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 TTI2Q6NXR4 508 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 RNF207Q6ZRF8 634 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.13■□□□□ 0.01
SEC13-203ENST00000383801 CPXCR1Q8N123 301 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 PROCA1Q8NCQ7 364 aaPredicted RBP15.13■□□□□ 0.01
SEC13-203ENST00000383801 EIF2AK1Q9BQI3 630 aaKnown RBP15.13■□□□□ 0.01
SEC13-203ENST00000383801 ZNF577Q9BSK1 485 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 JADE2Q9NQC1 790 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 UBIAD1Q9Y5Z9 338 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 RLFQ13129 1914 aa15.13■□□□□ 0.01
SEC13-203ENST00000383801 LOXHD1Q8IVV2 1947 aa15.12■□□□□ 0.01
SEC13-203ENST00000383801 IQCA1LA6NCM1 817 aa15.12■□□□□ 0.01
SEC13-203ENST00000383801 EYA4O95677 639 aa15.12■□□□□ 0.01
SEC13-203ENST00000383801 TUBB4AP04350 444 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms